Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 25.1_202017-07-20] 568 sequences; 18,568,655 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq388 93.3 6e-13 >seq388 Length=79685 Score = 93.3 bits (102), Expect = 6e-13 Identities = 121/162 (75%), Gaps = 9/162 (6%) Strand=Plus/Minus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||| |||||||||| |||||||||||| |||||||| ||| || |||||||| | Sbjct 63340 CTTATCGGTATGAACGCCAA-GCTCATGTGCCAATACATTGAGTTT-GTTGCCGACCGTC 63283 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGA---CGGCCAACCCGTTCCCATGG 1456699 | || | || | ||| || ||||| | ||| | |||||||| || | Sbjct 63282 TTCTTGTTGCTTTGGGCAACG-AGAAGATTT---GGAACTCTGCCAACCCCTTTGACTTT 63227 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 |||||| ||||||| ||| | |||||| |||||||||||||| Sbjct 63226 ATGGAGATGATCTCTCTCCAAGGCAAGGCCAACTTTTTCGAG 63185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177756415356016