Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
95.1_202017-07-20] 588 sequences; 18,602,782 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq316 129 5e-25
>seq316
Length=6457
Score = 129 bits (142), Expect = 5e-25
Identities = 239/346 (69%), Gaps = 6/346 (2%)
Strand=Plus/Plus
Query 30043 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30102
|| |||||||| || | | ||| || |||||||| ||| |||||| ||||| |||
Sbjct 3854 TTTGGGTTCCAAGCCGATAAGATAATCCGCCTGTCAGTTGGATTGTTCTTGATGGTGTCG 3913
Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTA 30161
| | ||||||| || || || || | || ||||| ||| || || |||||
Sbjct 3914 ATTACCCTTTGCAGTTGGTCGACTCCTTTGTCCTTATAGTC-GCCGTCGGCATCAGTGTA 3972
Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221
||| || || ||||| |||||||||||||||||||| |||||||| || || || ||
Sbjct 3973 CTCGGCACCAAAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCGTCT 4032
Query 30222 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30281
||| ||| || ||| |||| || ||| || ||||| | ||||||||| |||
Sbjct 4033 GTGGCCGAGCCCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCATCCCAGATCCCTAC 4092
Query 30282 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341
|||| |||||| | |||| || || | || |||||||||| ||||| |
Sbjct 4093 GCCCTGACTAGAGAGCACCTTGGCGTCGGTACAACCAGAAACGAACCACAAAAGCTCGGC 4152
Query 30342 CACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
| |||| | | || ||||| | |||||||| ||||| ||||
Sbjct 4153 AATGACG--CCGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 4196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408614671744124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |