Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 15.1_202017-07-20] 588 sequences; 18,516,783 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq351 235 7e-57 seq355 226 4e-54 seq400 221 2e-52 seq153 196 6e-45 seq101 187 3e-42 seq562 113 6e-20 seq354 113 6e-20 seq124 113 6e-20 seq34 109 7e-19 seq465 95.1 2e-14 >seq351 Length=117382 Score = 235 bits (260), Expect = 7e-57 Identities = 269/359 (75%), Gaps = 2/359 (1%) Strand=Plus/Plus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 ||||||||||||| || || ||||| | || ||||||||||||||||| || ||| | Sbjct 116738 CTCCCGAAGAAATCTCTTCCATGGTCCTTATCAAGATGAAGGAGACTGCTGAGGCTTACC 116797 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | ||| || || | || ||||| || || || || ||||||| || || |||| Sbjct 116798 TTGGTGGCACCGTCTCCAAGGCCGTTGTCACCGTCCCCGCCTACTTCAACGACTCTCAAC 116857 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAAT 195808 | ||||| || |||||||||| ||| ||||| ||||| | ||| || | || ||||| Sbjct 116858 GTCAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAAC 116916 Query 195809 GAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAAT 195868 || || || || ||||| || ||||| ||||| |||||||| || | || || || Sbjct 116917 GAGCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCCGAGGGCGAGAAGAAC 116976 Query 195869 GTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGT 195928 || |||||||| || || ||||||||||| || || ||||| ||| | | |||||| | Sbjct 116977 GTTTTGATCTTCGACCTTGGTGGTGGTACTTTCGACGTCTCTCTTTTGACTATTGAGGAG 117036 Query 195929 GGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || |||||||| |||||||| ||||| || |||||||| || || || Sbjct 117037 GGTATCTTCGAGGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 117095 >seq355 Length=11692 Score = 226 bits (250), Expect = 4e-54 Identities = 266/357 (75%), Gaps = 2/357 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| ||||| || ||||| | | |||||||||||||||||| || ||| | | Sbjct 988 CCTGAAGAGATTTCTTCCATGGTTCTTACTAAGATGAAGGAGACTGCTGAGGCTTACCTC 929 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||| || || | || ||||| || || || || ||||||| || || ||||| Sbjct 928 GGTGGCACCGTCTCCAAGGCCGTTGTTACCGTCCCCGCCTACTTCAACGACTCTCAACGT 869 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810 ||||| || |||||||||| ||| ||||| ||||| | |||| | | || ||||| || Sbjct 868 CAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAACGA 810 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870 || || || ||||| || ||||| ||||| |||||||| || | || || || || Sbjct 809 GCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCTGAGGGCGAGAAGAACGT 750 Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG 195930 |||||||| || || ||||||||||| || || ||||| ||| | | |||||| | || Sbjct 749 TTTGATCTTCGACCTTGGTGGTGGTACTTTCGACGTCTCTCTTTTGACTATTGAGGAGGG 690 Query 195931 TATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| ||||| || |||||||| |||||||| ||||| || |||||||| || || || Sbjct 689 TATCTTCGAGGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 633 Score = 140 bits (154), Expect = 4e-28 Identities = 335/504 (66%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| || || || | || || |||||||| || || ||||| || ||||| | ||| Sbjct 503 GCTCTCCGACGACTCCGAACCGCCTGTGAACGAGCTAAGCGAACCCTTTCTTCCGCTGCT 444 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | | ||||||| || || | || ||||| || |||||||| || | || ||| Sbjct 443 CAGACCACGATTGAGATCGACTCTCTCTTCGACGGTATCGACTTCTACACTTCCATCACC 384 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCT---GATTTGTTTAGGAAGTGTATGGAACCTGTT 196237 ||||| || || || ||| | || | || | || | ||||| || || Sbjct 383 CGTGCCCGATTCGAGGAGCT---CTGTCAGGACCTCTTCCGATCCACCATGGACCCCGTC 327 Query 196238 GAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTG 196297 || | || || || ||| | ||||| || ||||| ||| | || || |||||||| Sbjct 326 GAGAAGGTTCTCCGAGACTCCAAGATCGACAAGTCCTCCGTTAACGAGATCGTCCTTGTC 267 Query 196298 GGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAA 196357 || || || |||||||| || ||||| || || | |||| | | ||| | | Sbjct 266 GGTGGTTCCACCCGTATCCCCAAGATCCAGAAGCTTGTTTCCGACATGTTCTCTGGCCGA 207 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || |||| | |||||||| || || || || || |||||||| ||||| |||||| Sbjct 206 GAGCCCAACAGGTCCATCAACCCCGACGAGGCTGTCGCCTATGGTGCCGCCGTCCAGGCT 147 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTC---CAAGATCTTCTGCTACTTGATGTT 196474 ||||| || | || ||||| | | | | | || || | || | || || ||| Sbjct 146 GCTATCCTTAC---TGGTGACACTTCTGAGGCCACTCAGGACTTGCTCTTGCTCGACGTT 90 Query 196475 GCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGG 196534 || || | ||| ||||| | || || || |||||| | ||||| | || | ||| Sbjct 89 GCTCCTCTTTCCATGGGTATCGAGACTGCTGGTGGTATCATGACCCCCTTGATCAAGAGG 30 Query 196535 AACACAACTATTCCGACTAAGAAG 196558 ||||| ||| | || || |||||| Sbjct 29 AACACCACTGTCCCCACCAAGAAG 6 >seq400 Length=79726 Score = 221 bits (244), Expect = 2e-52 Identities = 187/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || || | || ||||| |||||||| ||||| || ||||||| Sbjct 78226 GTATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACTCTCGAAGTCGAGTCGT 78285 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| | || || |||||||| || |||||||| ||||| || |||| Sbjct 78286 CTGACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATC 78345 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||||| | ||||||||||||||||| ||||| ||||| ||||| || | || |||| Sbjct 78346 AGCAACGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACA 78405 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | |||||||| ||||| || ||||||||||| | || || |||||| Sbjct 78406 ACATCCAAAAGGAATCTACCCTTCACCTTGTTCTCCGTCTGCGTGGTGGT 78455 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || |||||||| || || ||||| || ||||| || || || ||| Sbjct 77719 GTATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAATCGA 77778 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 || || ||||| || |||| |||||||| ||||| ||||| || || || || || | Sbjct 77779 GCGATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACC 77838 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| ||| | ||||| || || || || |||||||| || || || || | ||||||| Sbjct 77839 AGCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACA 77898 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | | ||||||||||| ||||| || || || | | || || |||||| Sbjct 77899 ATATCCAAAAGGAGTCCACTCTCCATCTCGTCTTGCGTCTCCGAGGTGGT 77948 Score = 149 bits (164), Expect = 8e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| || || || ||||| || || || || ||| || || ||||| || |||| Sbjct 78530 CTTACGGGTAAGACAATCACTCTTGAAGTCGAATCGAGCGATACCATCGACAATGTCAAG 78589 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| ||||| ||||| || || || || |||||||||||||| || || || || Sbjct 78590 GCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGA 78649 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 ||||| ||||||||||| || || || | |||||||| ||||||||||||| ||||| Sbjct 78650 AAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTCCACTCTC 78709 Query 172063 CACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | | || || |||||| Sbjct 78710 CATCTCGTCTTGCGTCTCCGAGGTGGT 78736 Score = 141 bits (156), Expect = 1e-28 Identities = 138/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || || || || || || |||||||| || || || ||||| || Sbjct 77442 ATGCAAATTTTCGTCAAGACTCTCACCGGTAAGACTATCACTCTTGAAGTGGAGTCTTCC 77501 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || || ||||| || || || || || ||| Sbjct 77502 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 77561 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||| | || ||||||||||| |||||||||||||| | || ||| | || |||| Sbjct 77562 CAACGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTCTCCGACTACA 77619 >seq153 Length=95437 Score = 196 bits (216), Expect = 6e-45 Identities = 567/859 (66%), Gaps = 19/859 (2%) Strand=Plus/Plus Query 78068 TTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAG 78127 || || || ||||||||||| || || |||||||| || ||||| | || | ||||| Sbjct 83636 TTCAACGCCGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAGGAT 83695 Query 78128 GACTCTATTAATGGTATATACGGGACTCTCACAGA-GTGTGCTCAGATTTCTAAGTGGGC 78186 ||||| ||| ||||||| |||| ||||||| ||| ||||||||||| || ||| || Sbjct 83696 GACTCCATTGATGGTATCTACGATACTCTCA-AGACCTGTGCTCAGATCTCCAAGACTGC 83754 Query 78187 TGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAAC 78246 |||||||| |||||||| |||||| || | ||||| || ||| ||| || || Sbjct 83755 CGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTAC 83814 Query 78247 TAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTA 78306 |||||| | || | || || ||||||||||| | | | | | || ||||| || || Sbjct 83815 CAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGATA 83874 Query 78307 TGTCAACCAAGCGGGTCGTAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTG 78360 || | ||| ||| ||| ||| || | ||||| || || ||||| ||||| Sbjct 83875 CGTTGATCAA---GGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTG 83931 Query 78361 GCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCG 78420 |||||| |||||| | || || | || | | ||||| ||| | ||||| | || Sbjct 83932 GCACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACG 83991 Query 78421 ATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGA 78480 | | ||| | ||| || | ||||| | |||||||| |||||| | || || Sbjct 83992 AGCTCGTGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATC 84051 Query 78481 AGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGG 78540 | || | ||| ||||| | ||||| | || || ||| | || || ||||| Sbjct 84052 CGATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTACGG 84111 Query 78541 GGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTC-TCGCTATTAAGACAA 78599 |||||||| ||||| | || | |||| ||||| ||| | | | || || | Sbjct 84112 TGAAGAATTTGAAAAGCTTTATGAGAGCTACG-AGAGGCAGGGCAAGGGAAGGAAAACTA 84170 Query 78600 TTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCG 78658 | | || | ||| || ||| || || || | |||||| ||||| || ||| Sbjct 84171 TCAAAGC-CCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCT 84229 Query 78659 TATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCAT 78717 || || ||||| || |||| ||| ||||| ||||||||| |||| ||| ||| Sbjct 84230 TACATCTGCTACAAGGA-TGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCAT 84288 Query 78718 CAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGT 78777 |||| | |||||| || || ||||| |||| || | | ||||| ||||| Sbjct 84289 CAAATCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGT 84348 Query 78778 ATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAA-TTAAAGACATTTG 78836 |||||||| | ||| | ||||| || || || || | ||| | | | | || Sbjct 84349 CTGTAATCTTGCTTCTCTTGCTCTTCCTGCCTTCGTAGACCTGGAACGTCGCGTC-TATG 84407 Query 78837 ATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTG 78896 | | |||||| ||||| ||||| || | || || || || | | |||||| Sbjct 84408 ACTTCAAAAAGCTGCACGAGATTACCAAGGTTGTTACAAAGAACCTTGACACTGTAATCA 84467 Query 78897 ACCGTAACTACTACCCAGT 78915 |||||||||||| ||||| Sbjct 84468 CCCGTAACTACTATCCAGT 84486 >seq101 Length=33637 Score = 187 bits (206), Expect = 3e-42 Identities = 475/717 (66%), Gaps = 12/717 (2%) Strand=Plus/Plus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || | || || |||||||| | ||| ||||| Sbjct 14799 GTTCCTGCCTACTTCAACGACTCTCAGCGTCTCGCCACTAAGGACGCCGGTGCCATTGCC 14858 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | || | |||||||| ||||| || || || || ||||| || ||||| Sbjct 14859 GGTCTTGAGGTGCTCCGTATTATCAACGAACCTACTGCTGCCGCTATTGCCTACGGTCTT 14918 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||| |||| | || || || ||| || | ||||| || | ||||||||||| || Sbjct 14919 GACGAGAAGACCGAGGAGGAGCGAAACGTCCTCATCTTCGACTTGGGTGGTGGTACTTTC 14978 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| ||||| | ||| | || | ||| || ||||| ||||||||||| Sbjct 14979 GATGTCTCTCTTCTTACCATTCAGGGCAAGGTCTTCTCTGTCAAGGCCACTGCTGGTGAC 15038 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT---CATTTGTCTGATGAG 196018 |||||||| |||||||| || ||||| || | |||| | || || | |||| Sbjct 15039 ACTCATCTTGGTGGTGAGGACTTCGA-CAACAAC--CTCCTTGAGCACTTCAAGGCTGAG 15095 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| | |||| ||| || || |||| | | | ||| | || || | || Sbjct 15096 TTCAAGAGGAAGACCAAGCTTGACATCTCTGACGACGCCCGTGCTTTGCGACGATTGAGA 15155 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 |||| ||||| ||||| || |||||||||||||| |||| || | || ||| | Sbjct 15156 TCTGCTTGTGAGCGTGCTAAGCGAACTCTCTCTTCCGTTACTCAGACCACCGTCGAGGTC 15215 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 || || | | | || | ||||||| | | | || |||||||| | || || ||| Sbjct 15216 GACTCTCTCTACCAGGGTACCGACTTCTCTTCCAACATCACCCGTGCTAGGTTCGAGGAG 15275 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGAC 196255 | ||| | | | | || |||| || | || || || || | || || ||| Sbjct 15276 ATCAACGCCG--TCGCTT-TCAAGTCTACCGTTGACCCCGTAGAGAAGGTCCTCAAGGAC 15332 Query 196256 GCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATT 196315 | ||||| | | |||||||| || ||||||||||| || || || |||||||| Sbjct 15333 TCCAAGATCCCTGCCGCCAAGGTTGACGACATTGTCCTTGTTGGTGGTTCTACCCGTATC 15392 Query 196316 CCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATC 196375 || ||||| ||| | | || | ||| | | | | ||||| | ||| Sbjct 15393 CCCAAGATCCAATCTCTCGTCTCCGAGTACTTTGGTGGTCGTCAGCTCAACAAGTCCATC 15452 Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 ||||| || || || |||||||| ||||| ||||| |||||||| | ||| | ||| Sbjct 15453 AACCCCGACGAGGCTGTTGCTTACGGTGCCGCCGTCCAGGCTGCCGTCCTCACCGGT 15509 >seq562 Length=158092 Score = 113 bits (124), Expect = 6e-20 Identities = 282/417 (68%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598 ||||||| ||| || || |||||| | || ||||| |||||||||| ||||| || || Sbjct 94896 TGGTGCCAAAATTCCTCGGGGTGCTATCCTTTCCGGTCCCCCGGGTACCGGTAAGACTCT 94837 Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTT-CAGTGCTCCGCGGC-G 198656 ||| || |||| ||| || ||| | |||| || || ||| | || ||| | | | Sbjct 94836 TCTCGCCAAGGCTACCGCCGGAGAAGCTGGTGTGCCTTTCCTTTCCGT-CTCTGGTTCTG 94778 Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716 |||| | |||| ||||| || || || ||| | || ||||| || | || | | Sbjct 94777 AGTT-CGTCGAAATGTTTGTCGGCGTCGGTCCCTCCCGAGTCCGTGACTTGTTCGCAAAC 94719 Query 198717 GCACGTGAA-AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAA 198775 || | ||| ||| ||||||||||||||| ||||||| || ||||| | || ||| Sbjct 94718 GC-CAAGAAGAATGCCCCATGTATCATCTTCGTTGATGAAATCGACGCCATCGGCAAGTC 94660 Query 198776 GCGTGG------TGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCA 198829 ||||| ||| | ||| |||||| ||||||||||| || | ||||| Sbjct 94659 CCGTGGCAAGGGTGGCA--ACTTTGG-TGGTAACGATGAGCGTGAATCCACTTTGAACCA 94603 Query 198830 GCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTATCGTGGTGATTGCTGC 198886 |||| | || ||||| ||||| | ||| ||| | |||| || | |||| Sbjct 94602 GCTTTTGGTCGAAATGGACGGTTTCGGTACCAACGAGCACG---TCGTCGTTTTGGCTGG 94546 Query 198887 TACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCG 198943 ||| || || |||| |||| ||| ||| | | ||||| |||||||||||||| Sbjct 94545 TACGAACAGACCTGATGTCCTTGATTCTGCCTTAATGCGTCCTGGTCGATTCGACCG 94489 >seq354 Length=39936 Score = 113 bits (124), Expect = 6e-20 Identities = 306/467 (66%), Gaps = 6/467 (1%) Strand=Plus/Minus Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 |||||||| || || || || || |||||||| ||||| ||||||||||| || | ||| Sbjct 39864 ATCAACCCCGACGAGGCTGTCGCCTATGGTGCCGCCGTCCAGGCTGCTATCCTTACTGGT 39805 Query 196433 GTTGACAATAATAACGTC---CAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTG 196489 | ||| | | | | | || || | || | || || ||||| || | ||| || Sbjct 39804 G---ACACTTCTGAGGCCACTCAGGACTTGCTCTTGCTCGACGTTGCTCCTCTTTCCATG 39748 Query 196490 GGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCG 196549 ||| | || || || |||||| | ||||| | || | |||||||| ||| | || Sbjct 39747 GGTATCGAGACTGCTGGTGGTATCATGACCCCCTTGATCAAGAGGAACACCACTGTCCCC 39688 Query 196550 ACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 || |||||| ||||||| || || || || || || || || ||||| || || Sbjct 39687 ACCAAGAAGTCTGAAGTCTTCTCTACCTACTCTGACAACCAGCCTGGTGTCTTGATCCAG 39628 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 || | || || || || | | ||||| | | | || || | || || || Sbjct 39627 GTCTTCGAGGGTGAGCGAGCTAAGACTAAGGACTGCAACTTGCTCGGCAAGTTTGAATTA 39568 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 | || ||||| | || || ||||||| || || || | || | ||| || || ||| Sbjct 39567 TCCGGTATTCCTCCGGCCCCACGAGGTGTCCCTCAAATCGAAGTGTCCTTTGACATTGAC 39508 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 || || || || | ||||| | || | ||||| || | || || | ||||| Sbjct 39507 GCCAACGGTATCTTGAACGTTAACGCCGCCGACAAATCTACCGGTAAGACCAGTAAGATC 39448 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACG 196836 || |||||||||||||| | | || || |||||||||||||| Sbjct 39447 ACCATCACCAATGACAAGGGTAGATTGTCCAAAGAGGAAATTGAACG 39401 >seq124 Length=66428 Score = 113 bits (124), Expect = 6e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || |||||||||||||||||||| || ||||| ||||| || |||| Sbjct 51623 CTTACCGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTCAAG 51564 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||| || || ||||| || || || || || || || ||| | || || || || Sbjct 51563 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGATTGATCTTCGCCGGA 51504 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || ||||| || || || | ||||| |||| |||| Sbjct 51503 AAGCAGCTCGAGGACGGCAGGACCCTTTCTGACTACA 51467 >seq34 Length=38783 Score = 109 bits (120), Expect = 7e-19 Identities = 195/281 (69%), Gaps = 14/281 (5%) Strand=Plus/Plus Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 |||| | ||||| ||||||||||||| || || || || ||||| || ||||| |||| Sbjct 15452 CAGTCATCACTGTCCCTGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTG 15511 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 |||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 15512 GCTCTATCGCTGGTCTTGAAGTCCTTCGTGTCATCAACGAGCCTACTGCCGCTGCTCTTG 15571 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGG 195888 | |||||||| ||||||||| || || | || |||| ||| || | || Sbjct 15572 CCTATGGTCTCGACAAGAACGAGTCCGCGG-------TG-ATTGCTGTCTACGACTTGGG 15623 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAG 195946 ||||||||| || ||| |||| | || | || |||| ||| | ||||| || ||| Sbjct 15624 TGGTGGTACTTTCGATATCTCGATCCTTGAGATGCAGAAG--GGTGTTTTCGAGGTCAAG 15681 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||| || || || ||||||||||| ||||| Sbjct 15682 TCTACCAACGGTGACACCCACCTTGGTGGTGAAGACTTCGA 15722 >seq465 Length=210831 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 || || ||||||||||| || |||||||| || ||| |||||| | ||| | || || Sbjct 179695 GACCTTGGTGGTGGTACTTTCGATGTCTCTCTCCTCTCTATTGAGGACGGTGTCTTTGAG 179636 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||||||||||||| ||||| || |||||||| |||||||| Sbjct 179635 GTCTTGGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTCGA 179589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657857564711360