Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
15.1_202017-07-20] 588 sequences; 18,516,783 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq319 134 1e-26
>seq319
Length=40616
Score = 134 bits (148), Expect = 1e-26
Identities = 240/346 (69%), Gaps = 6/346 (2%)
Strand=Plus/Plus
Query 30116 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30175
|| |||||||| || | | ||| || |||||||| ||| |||||| ||||| |||
Sbjct 3855 TTTGGGTTCCAAGCCGATAAGATAATCCGCCTGTCAGTTGGATTGTTCTTGATGGTGTCG 3914
Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTA 30234
| | ||||||| || || || || | || ||||| ||| || || |||||
Sbjct 3915 ATTACCCTTTGCAGTTGGTCGACTCCTTTGTCCTTATAGTC-GCCGTCGGCATCAGTGTA 3973
Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294
||| || || ||||| |||||||||||||||||||| |||||||| || || || ||
Sbjct 3974 CTCGGCACCAAAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCGTCT 4033
Query 30295 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354
||| ||| || ||| |||| || ||| || ||||| | ||||||||| |||
Sbjct 4034 GTGGCCGAGCCCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCATCCCAGATCCCTAC 4093
Query 30355 CCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414
|||| ||||||| | |||| || || | || |||||||||| ||||| |
Sbjct 4094 GCCCTGACTAGAGAGCACCTTGGCGTCGGTACAACCAGAAACGAACCACAAAAGCTCGGC 4153
Query 30415 CACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30458
| |||| | | || ||||| | |||||||| ||||| ||||
Sbjct 4154 AATGACG--CCGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 4197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406307488278096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |