Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 35.1_202017-07-20] 511 sequences; 18,560,305 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq260 82.4 5e-11 >seq260 Length=40557 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 25777 TCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCA 25836 || |||||||| || || |||| |||||||||||||||||||| ||||| || || || Sbjct 3945 TCAGTGTACTCGGCACCAAAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCT 4004 Query 25837 TCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAG 25896 || ||||| | | || ||| |||| || ||| || || || | |||||| Sbjct 4005 TCCCGTCTGTGGCCGAGCCCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCATCCCAG 4064 Query 25897 ATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGC 25956 ||| ||| |||| |||||| | |||| || || | || |||||||||| Sbjct 4065 ATCCCTACGCCCTGACTAGAGAGCACCTTGGCGTCGGTACAACCAGAAACGAACCACAAA 4124 Query 25957 AGCTCCGCCGTGACG 25971 ||||| || ||||| Sbjct 4125 AGCTCGGCAATGACG 4139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340135481686803