Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 35.1_202017-07-20] 511 sequences; 18,560,305 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq281 271 1e-67 seq284 226 4e-54 seq324 221 2e-52 seq115 196 6e-45 seq35 187 3e-42 seq481 113 6e-20 seq283 113 6e-20 seq57 113 6e-20 seq20 109 7e-19 seq378 95.1 2e-14 >seq281 Length=178094 Score = 271 bits (300), Expect = 1e-67 Identities = 650/987 (66%), Gaps = 66/987 (7%) Strand=Plus/Plus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 ||||||||||||| || || ||||| | || ||||||||||||||||| || ||| | Sbjct 177111 CTCCCGAAGAAATCTCTTCCATGGTCCTTATCAAGATGAAGGAGACTGCTGAGGCTTACC 177170 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | ||| || || | || ||||| || || || || ||||||| || || |||| Sbjct 177171 TTGGTGGCACCGTCTCCAAGGCCGTTGTCACCGTCCCCGCCTACTTCAACGACTCTCAAC 177230 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAAT 195808 | ||||| || |||||||||| ||| ||||| ||||| | ||| || | || ||||| Sbjct 177231 GTCAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAAC 177289 Query 195809 GAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAAT 195868 || || || || ||||| || ||||| ||||| |||||||| || | || || || Sbjct 177290 GAGCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCCGAGGGCGAGAAGAAC 177349 Query 195869 GTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGT 195928 || |||||||| || || ||||||||||| || || ||||| ||| | | |||||| | Sbjct 177350 GTTTTGATCTTCGACCTTGGTGGTGGTACTTTCGACGTCTCTCTTTTGACTATTGAGGAG 177409 Query 195929 GGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| ||||| || |||||||| |||||||| ||||| || |||||||| || || || Sbjct 177410 GGTATCTTCGAGGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGAC 177469 Query 195989 GCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTC 196047 || ||| || || || ||| | |||||| | ||||| ||||| | || || Sbjct 177470 AACCGACTTGTCAACCACTTCGTC-CAAGAGTTCAAGAGGAAGAACAAGAAGGGTAAGTC 177528 Query 196048 ---------------TGGA------AATCCT----------------------------- 196057 |||| ||| || Sbjct 177529 ACCTACGATTACTCATGGACGCGTCAATGCTGATCTGCTGCAGACCTTTCTTCTAACGCC 177588 Query 196058 AGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG 196117 | ||||| || || || | ||||| |||||||| || || |||||||| ||||| | Sbjct 177589 CGAGCTCTCCGACGACTCCGAACTGCCTGTGAACGAGCTAAGCGAACTCTTTCTTCCGCT 177648 Query 196118 GCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATT 196177 || || || ||||||| || || | || ||||| || |||||||| || | || Sbjct 177649 GCCCAGACTTCTATTGAGATCGACTCTCTCTTCGACGGTATCGACTTCTACACTTCCATC 177708 Query 196178 ACCCGTGCACGTTTTGAAGAGTTAAACTCT---GATTTGTTTAGGAAGTGTATGGAACCT 196234 |||||||| || || || ||| | || | || | || | ||||| || Sbjct 177709 ACCCGTGCCCGATTCGAGGAGCT---CTGTCAGGACCTCTTCCGATCCACCATGGACCCC 177765 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294 || || | || || || ||| | ||||| || ||||| ||| | || || |||||| Sbjct 177766 GTCGAGAAGGTTCTCCGAGACTCCAAGATCGACAAGTCCTCCGTTAACGAGATCGTCCTT 177825 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || |||||||| || ||||| || || | |||| | | ||| | Sbjct 177826 GTCGGCGGTTCCACCCGTATCCCCAAGATCCAGAAGCTTGTTTCCGACATGTTCTCTGGC 177885 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAG 196414 ||| |||| | |||||||| || || || || || |||||||| ||||| ||| Sbjct 177886 CGAGAGCCCAACAGGTCCATCAACCCCGACGAGGCTGTCGCCTATGGTGCCGCCGTCCAG 177945 Query 196415 GCTGCTATTCTCTCAGGTGTTGACAATAATAACGTC---CAAGATCTTCTGCTACTTGAT 196471 |||||||| || | || ||||| | | | | | || || | || | || || Sbjct 177946 GCTGCTATCCTTAC---TGGTGACACTTCTGAGGCCACTCAGGACTTGCTCTTGCTCGAC 178002 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 ||||| || | ||| ||||| | || || || |||||| | ||||| | || | Sbjct 178003 GTTGCTCCTCTTTCCATGGGTATCGAGACTGCTGGTGGTATCATGACCCCCTTGATCAAG 178062 Query 196532 AGGAACACAACTATTCCGACTAAGAAG 196558 |||||||| ||| | || || |||||| Sbjct 178063 AGGAACACCACTGTCCCCACCAAGAAG 178089 >seq284 Length=57735 Score = 226 bits (250), Expect = 4e-54 Identities = 266/357 (75%), Gaps = 2/357 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| ||||| || ||||| | | |||||||||||||||||| || ||| | | Sbjct 988 CCTGAAGAGATTTCTTCCATGGTTCTTACTAAGATGAAGGAGACTGCTGAGGCTTACCTC 929 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||| || || | || ||||| || || || || ||||||| || || ||||| Sbjct 928 GGTGGCACCGTCTCCAAGGCCGTTGTTACCGTCCCCGCCTACTTCAACGACTCTCAACGT 869 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810 ||||| || |||||||||| ||| ||||| ||||| | |||| | | || ||||| || Sbjct 868 CAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAACGA 810 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870 || || || ||||| || ||||| ||||| |||||||| || | || || || || Sbjct 809 GCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCTGAGGGCGAGAAGAACGT 750 Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG 195930 |||||||| || || ||||||||||| || || ||||| ||| | | |||||| | || Sbjct 749 TTTGATCTTCGACCTTGGTGGTGGTACTTTCGACGTCTCTCTTTTGACTATTGAGGAGGG 690 Query 195931 TATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| ||||| || |||||||| |||||||| ||||| || |||||||| || || || Sbjct 689 TATCTTCGAGGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 633 Score = 140 bits (154), Expect = 4e-28 Identities = 335/504 (66%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| || || || | || || |||||||| || || ||||| || ||||| | ||| Sbjct 503 GCTCTCCGACGACTCCGAACCGCCTGTGAACGAGCTAAGCGAACCCTTTCTTCCGCTGCT 444 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | | ||||||| || || | || ||||| || |||||||| || | || ||| Sbjct 443 CAGACCACGATTGAGATCGACTCTCTCTTCGACGGTATCGACTTCTACACTTCCATCACC 384 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCT---GATTTGTTTAGGAAGTGTATGGAACCTGTT 196237 ||||| || || || ||| | || | || | || | ||||| || || Sbjct 383 CGTGCCCGATTCGAGGAGCT---CTGTCAGGACCTCTTCCGATCCACCATGGACCCCGTC 327 Query 196238 GAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTG 196297 || | || || || ||| | ||||| || ||||| ||| | || || |||||||| Sbjct 326 GAGAAGGTTCTCCGAGACTCCAAGATCGACAAGTCCTCCGTTAACGAGATCGTCCTTGTC 267 Query 196298 GGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAA 196357 || || || |||||||| || ||||| || || | |||| | | ||| | | Sbjct 266 GGTGGTTCCACCCGTATCCCCAAGATCCAGAAGCTTGTTTCCGACATGTTCTCTGGCCGA 207 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || |||| | |||||||| || || || || || |||||||| ||||| |||||| Sbjct 206 GAGCCCAACAGGTCCATCAACCCCGACGAGGCTGTCGCCTATGGTGCCGCCGTCCAGGCT 147 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTC---CAAGATCTTCTGCTACTTGATGTT 196474 ||||| || | || ||||| | | | | | || || | || | || || ||| Sbjct 146 GCTATCCTTAC---TGGTGACACTTCTGAGGCCACTCAGGACTTGCTCTTGCTCGACGTT 90 Query 196475 GCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGG 196534 || || | ||| ||||| | || || || |||||| | ||||| | || | ||| Sbjct 89 GCTCCTCTTTCCATGGGTATCGAGACTGCTGGTGGTATCATGACCCCCTTGATCAAGAGG 30 Query 196535 AACACAACTATTCCGACTAAGAAG 196558 ||||| ||| | || || |||||| Sbjct 29 AACACCACTGTCCCCACCAAGAAG 6 >seq324 Length=79723 Score = 221 bits (244), Expect = 2e-52 Identities = 187/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || || | || ||||| |||||||| ||||| || ||||||| Sbjct 78223 GTATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACTCTCGAAGTCGAGTCGT 78282 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| | || || |||||||| || |||||||| ||||| || |||| Sbjct 78283 CTGACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATC 78342 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||||| | ||||||||||||||||| ||||| ||||| ||||| || | || |||| Sbjct 78343 AGCAACGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACA 78402 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | |||||||| ||||| || ||||||||||| | || || |||||| Sbjct 78403 ACATCCAAAAGGAATCTACCCTTCACCTTGTTCTCCGTCTGCGTGGTGGT 78452 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || |||||||| || || ||||| || ||||| || || || ||| Sbjct 77716 GTATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAATCGA 77775 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 || || ||||| || |||| |||||||| ||||| ||||| || || || || || | Sbjct 77776 GCGATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACC 77835 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| ||| | ||||| || || || || |||||||| || || || || | ||||||| Sbjct 77836 AGCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACA 77895 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | | ||||||||||| ||||| || || || | | || || |||||| Sbjct 77896 ATATCCAAAAGGAGTCCACTCTCCATCTCGTCTTGCGTCTCCGAGGTGGT 77945 Score = 149 bits (164), Expect = 8e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| || || || ||||| || || || || ||| || || ||||| || |||| Sbjct 78527 CTTACGGGTAAGACAATCACTCTTGAAGTCGAATCGAGCGATACCATCGACAATGTCAAG 78586 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| ||||| ||||| || || || || |||||||||||||| || || || || Sbjct 78587 GCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGA 78646 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 ||||| ||||||||||| || || || | |||||||| ||||||||||||| ||||| Sbjct 78647 AAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTCCACTCTC 78706 Query 172063 CACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | | || || |||||| Sbjct 78707 CATCTCGTCTTGCGTCTCCGAGGTGGT 78733 Score = 141 bits (156), Expect = 1e-28 Identities = 138/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || || || || || || |||||||| || || || ||||| || Sbjct 77439 ATGCAAATTTTCGTCAAGACTCTCACCGGTAAGACTATCACTCTTGAAGTGGAGTCTTCC 77498 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || || ||||| || || || || || ||| Sbjct 77499 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 77558 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||| | || ||||||||||| |||||||||||||| | || ||| | || |||| Sbjct 77559 CAACGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTCTCCGACTACA 77616 >seq115 Length=95448 Score = 196 bits (216), Expect = 6e-45 Identities = 567/859 (66%), Gaps = 19/859 (2%) Strand=Plus/Plus Query 78068 TTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAG 78127 || || || ||||||||||| || || |||||||| || ||||| | || | ||||| Sbjct 83636 TTCAACGCCGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAGGAT 83695 Query 78128 GACTCTATTAATGGTATATACGGGACTCTCACAGA-GTGTGCTCAGATTTCTAAGTGGGC 78186 ||||| ||| ||||||| |||| ||||||| ||| ||||||||||| || ||| || Sbjct 83696 GACTCCATTGATGGTATCTACGATACTCTCA-AGACCTGTGCTCAGATCTCCAAGACTGC 83754 Query 78187 TGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAAC 78246 |||||||| |||||||| |||||| || | ||||| || ||| ||| || || Sbjct 83755 CGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTAC 83814 Query 78247 TAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTA 78306 |||||| | || | || || ||||||||||| | | | | | || ||||| || || Sbjct 83815 CAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGATA 83874 Query 78307 TGTCAACCAAGCGGGTCGTAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTG 78360 || | ||| ||| ||| ||| || | ||||| || || ||||| ||||| Sbjct 83875 CGTTGATCAA---GGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTG 83931 Query 78361 GCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCG 78420 |||||| |||||| | || || | || | | ||||| ||| | ||||| | || Sbjct 83932 GCACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACG 83991 Query 78421 ATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGA 78480 | | ||| | ||| || | ||||| | |||||||| |||||| | || || Sbjct 83992 AGCTCGTGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATC 84051 Query 78481 AGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGG 78540 | || | ||| ||||| | ||||| | || || ||| | || || ||||| Sbjct 84052 CGATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTACGG 84111 Query 78541 GGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTC-TCGCTATTAAGACAA 78599 |||||||| ||||| | || | |||| ||||| ||| | | | || || | Sbjct 84112 TGAAGAATTTGAAAAGCTTTATGAGAGCTACG-AGAGGCAGGGCAAGGGAAGGAAAACTA 84170 Query 78600 TTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCG 78658 | | || | ||| || ||| || || || | |||||| ||||| || ||| Sbjct 84171 TCAAAGC-CCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCT 84229 Query 78659 TATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCAT 78717 || || ||||| || |||| ||| ||||| ||||||||| |||| ||| ||| Sbjct 84230 TACATCTGCTACAAGGA-TGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCAT 84288 Query 78718 CAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGT 78777 |||| | |||||| || || ||||| |||| || | | ||||| ||||| Sbjct 84289 CAAATCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGT 84348 Query 78778 ATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAA-TTAAAGACATTTG 78836 |||||||| | ||| | ||||| || || || || | ||| | | | | || Sbjct 84349 CTGTAATCTTGCTTCTCTTGCTCTTCCTGCCTTCGTAGACCTGGAACGTCGCGTC-TATG 84407 Query 78837 ATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTG 78896 | | |||||| ||||| ||||| || | || || || || | | |||||| Sbjct 84408 ACTTCAAAAAGCTGCACGAGATTACCAAGGTTGTTACAAAGAACCTTGACACTGTAATCA 84467 Query 78897 ACCGTAACTACTACCCAGT 78915 |||||||||||| ||||| Sbjct 84468 CCCGTAACTACTATCCAGT 84486 >seq35 Length=33713 Score = 187 bits (206), Expect = 3e-42 Identities = 475/717 (66%), Gaps = 12/717 (2%) Strand=Plus/Plus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || | || || |||||||| | ||| ||||| Sbjct 14793 GTTCCTGCCTACTTCAACGACTCTCAGCGTCTCGCCACTAAGGACGCCGGTGCCATTGCC 14852 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | || | |||||||| ||||| || || || || ||||| || ||||| Sbjct 14853 GGTCTTGAGGTGCTCCGTATTATCAACGAACCTACTGCTGCCGCTATTGCCTACGGTCTT 14912 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||| |||| | || || || ||| || | ||||| || | ||||||||||| || Sbjct 14913 GACGAGAAGACCGAGGAGGAGCGAAACGTCCTCATCTTCGACTTGGGTGGTGGTACTTTC 14972 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| ||||| | ||| | || | ||| || ||||| ||||||||||| Sbjct 14973 GATGTCTCTCTTCTTACCATTCAGGGCAAGGTCTTCTCTGTCAAGGCCACTGCTGGTGAC 15032 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT---CATTTGTCTGATGAG 196018 |||||||| |||||||| || ||||| || | |||| | || || | |||| Sbjct 15033 ACTCATCTTGGTGGTGAGGACTTCGA-CAACAAC--CTCCTTGAGCACTTCAAGGCTGAG 15089 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| | |||| ||| || || |||| | | | ||| | || || | || Sbjct 15090 TTCAAGAGGAAGACCAAGCTTGACATCTCTGACGACGCCCGTGCTTTGCGACGATTGAGA 15149 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 |||| ||||| ||||| || |||||||||||||| |||| || | || ||| | Sbjct 15150 TCTGCTTGTGAGCGTGCTAAGCGAACTCTCTCTTCCGTTACTCAGACCACCGTCGAGGTC 15209 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 || || | | | || | ||||||| | | | || |||||||| | || || ||| Sbjct 15210 GACTCTCTCTACCAGGGTACCGACTTCTCTTCCAACATCACCCGTGCTAGGTTCGAGGAG 15269 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGAC 196255 | ||| | | | | || |||| || | || || || || | || || ||| Sbjct 15270 ATCAACGCCG--TCGCTT-TCAAGTCTACCGTTGACCCCGTAGAGAAGGTCCTCAAGGAC 15326 Query 196256 GCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATT 196315 | ||||| | | |||||||| || ||||||||||| || || || |||||||| Sbjct 15327 TCCAAGATCCCTGCCGCCAAGGTTGACGACATTGTCCTTGTTGGTGGTTCTACCCGTATC 15386 Query 196316 CCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATC 196375 || ||||| ||| | | || | ||| | | | | ||||| | ||| Sbjct 15387 CCCAAGATCCAATCTCTCGTCTCCGAGTACTTTGGTGGTCGTCAGCTCAACAAGTCCATC 15446 Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 ||||| || || || |||||||| ||||| ||||| |||||||| | ||| | ||| Sbjct 15447 AACCCCGACGAGGCTGTTGCTTACGGTGCCGCCGTCCAGGCTGCCGTCCTCACCGGT 15503 >seq481 Length=235307 Score = 113 bits (124), Expect = 6e-20 Identities = 282/417 (68%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598 ||||||| ||| || || |||||| | || ||||| |||||||||| ||||| || || Sbjct 94741 TGGTGCCAAAATTCCTCGGGGTGCTATCCTTTCCGGTCCCCCGGGTACCGGTAAGACTCT 94682 Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTT-CAGTGCTCCGCGGC-G 198656 ||| || |||| ||| || ||| | |||| || || ||| | || ||| | | | Sbjct 94681 TCTCGCCAAGGCTACCGCCGGAGAAGCTGGTGTGCCTTTCCTTTCCGT-CTCTGGTTCTG 94623 Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716 |||| | |||| ||||| || || || ||| | || ||||| || | || | | Sbjct 94622 AGTT-CGTCGAAATGTTTGTCGGCGTCGGTCCCTCCCGAGTCCGTGACTTGTTCGCAAAC 94564 Query 198717 GCACGTGAA-AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAA 198775 || | ||| ||| ||||||||||||||| ||||||| || ||||| | || ||| Sbjct 94563 GC-CAAGAAGAATGCCCCATGTATCATCTTCGTTGATGAAATCGACGCCATCGGCAAGTC 94505 Query 198776 GCGTGG------TGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCA 198829 ||||| ||| | ||| |||||| ||||||||||| || | ||||| Sbjct 94504 CCGTGGCAAGGGTGGCA--ACTTTGG-TGGTAACGATGAGCGTGAATCCACTTTGAACCA 94448 Query 198830 GCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTATCGTGGTGATTGCTGC 198886 |||| | || ||||| ||||| | ||| ||| | |||| || | |||| Sbjct 94447 GCTTTTGGTCGAAATGGACGGTTTCGGTACCAACGAGCACG---TCGTCGTTTTGGCTGG 94391 Query 198887 TACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCG 198943 ||| || || |||| |||| ||| ||| | | ||||| |||||||||||||| Sbjct 94390 TACGAACAGACCTGATGTCCTTGATTCTGCCTTAATGCGTCCTGGTCGATTCGACCG 94334 >seq283 Length=39841 Score = 113 bits (124), Expect = 6e-20 Identities = 306/467 (66%), Gaps = 6/467 (1%) Strand=Plus/Minus Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 |||||||| || || || || || |||||||| ||||| ||||||||||| || | ||| Sbjct 39769 ATCAACCCCGACGAGGCTGTCGCCTATGGTGCCGCCGTCCAGGCTGCTATCCTTACTGGT 39710 Query 196433 GTTGACAATAATAACGTC---CAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTG 196489 | ||| | | | | | || || | || | || || ||||| || | ||| || Sbjct 39709 G---ACACTTCTGAGGCCACTCAGGACTTGCTCTTGCTCGACGTTGCTCCTCTTTCCATG 39653 Query 196490 GGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCG 196549 ||| | || || || |||||| | ||||| | || | |||||||| ||| | || Sbjct 39652 GGTATCGAGACTGCTGGTGGTATCATGACCCCCTTGATCAAGAGGAACACCACTGTCCCC 39593 Query 196550 ACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 || |||||| ||||||| || || || || || || || || ||||| || || Sbjct 39592 ACCAAGAAGTCTGAAGTCTTCTCTACCTACTCTGACAACCAGCCTGGTGTCTTGATCCAG 39533 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 || | || || || || | | ||||| | | | || || | || || || Sbjct 39532 GTCTTCGAGGGTGAGCGAGCTAAGACTAAGGACTGCAACTTGCTCGGCAAGTTTGAATTA 39473 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 | || ||||| | || || ||||||| || || || | || | ||| || || ||| Sbjct 39472 TCCGGTATTCCTCCGGCCCCACGAGGTGTCCCTCAAATCGAAGTGTCCTTTGACATTGAC 39413 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 || || || || | ||||| | || | ||||| || | || || | ||||| Sbjct 39412 GCCAACGGTATCTTGAACGTTAACGCCGCCGACAAATCTACCGGTAAGACCAGTAAGATC 39353 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACG 196836 || |||||||||||||| | | || || |||||||||||||| Sbjct 39352 ACCATCACCAATGACAAGGGTAGATTGTCCAAAGAGGAAATTGAACG 39306 >seq57 Length=66481 Score = 113 bits (124), Expect = 6e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || |||||||||||||||||||| || ||||| ||||| || |||| Sbjct 51628 CTTACCGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTCAAG 51569 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||| || || ||||| || || || || || || || ||| | || || || || Sbjct 51568 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGATTGATCTTCGCCGGA 51509 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || ||||| || || || | ||||| |||| |||| Sbjct 51508 AAGCAGCTCGAGGACGGCAGGACCCTTTCTGACTACA 51472 >seq20 Length=36368 Score = 109 bits (120), Expect = 7e-19 Identities = 195/281 (69%), Gaps = 14/281 (5%) Strand=Plus/Plus Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 |||| | ||||| ||||||||||||| || || || || ||||| || ||||| |||| Sbjct 15446 CAGTCATCACTGTCCCTGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTG 15505 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 |||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 15506 GCTCTATCGCTGGTCTTGAAGTCCTTCGTGTCATCAACGAGCCTACTGCCGCTGCTCTTG 15565 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGG 195888 | |||||||| ||||||||| || || | || |||| ||| || | || Sbjct 15566 CCTATGGTCTCGACAAGAACGAGTCCGCGG-------TG-ATTGCTGTCTACGACTTGGG 15617 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAG 195946 ||||||||| || ||| |||| | || | || |||| ||| | ||||| || ||| Sbjct 15618 TGGTGGTACTTTCGATATCTCGATCCTTGAGATGCAGAAG--GGTGTTTTCGAGGTCAAG 15675 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||| || || || ||||||||||| ||||| Sbjct 15676 TCTACCAACGGTGACACCCACCTTGGTGGTGAAGACTTCGA 15716 >seq378 Length=206756 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 || || ||||||||||| || |||||||| || ||| |||||| | ||| | || || Sbjct 179705 GACCTTGGTGGTGGTACTTTCGATGTCTCTCTCCTCTCTATTGAGGACGGTGTCTTTGAG 179646 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||||||||||||| ||||| || |||||||| |||||||| Sbjct 179645 GTCTTGGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTCGA 179599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858197903920