Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 55.1_202017-07-20] 587 sequences; 18,505,623 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq449 116 8e-21 >seq449 Length=79778 Score = 116 bits (128), Expect = 8e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 230419 TTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACA 230477 ||||||| |||||| | || ||| | ||||| || |||||||| | || ||| | || Sbjct 63412 TTCATTTAAGACGCTCTCCCC-GTCTCTCTTATCGGTATGAACGCCAAGCTCATGTGCCA 63354 Query 230478 GTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAA 230537 ||||| || || || |||||||| || ||||||| | || ||||||| | | || Sbjct 63353 ATACATTGAGTTTGTTGCCGACCGTCTTCTTGTTGCTTTGGGCAACGAGAAGATTTGGAA 63294 Query 230538 CTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTT 230597 |||| ||||||||||| ||||||||| | || || || ||||| ||| ||||||| || Sbjct 63293 CTCTGCGAACCCCTTTGACTTTATGGAGATGATCTCTCTCCAAGGCAAGGCCAACTTTTT 63234 Query 230598 CGA 230600 ||| Sbjct 63233 CGA 63231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816044171810