Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq449 89.7 5e-13
>seq449
Length=79778
Score = 89.7 bits (98), Expect = 5e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT 58022
|||| |||| | || || || || || ||||| || ||||| ||||| || || ||
Sbjct 63709 TTCGGCGAGCGACTCATTGCTTTTGCTGCCGTGGAGGGTATCTTCTTCTCTGGTTCTTTC 63650
Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082
||| | || || ||| | ||||| || || || ||||| || || || || ||||||
Sbjct 63649 GCGTCCATCTTCTGGCTTAAGAAGCGAGGTCTCATGCCTGGTCTCACCTTCTCTAACGAG 63590
Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
| || || || |||||||||||||| || || ||||| || ||
Sbjct 63589 CTCATCTCTCGAGACGAGGGTCTCCACACCGACTTTGCCTGTCT 63546
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||| |||| || || || ||||| | || || || ||||
Sbjct 78274 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACTCTTGAAGTCGAGTCGTCT 78333
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| | || || || || |||||||||||| | || || || |||
Sbjct 78334 GACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 78393
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| || | || || ||||| ||||| |||| || | ||| | ||| || |||
Sbjct 78394 CAACGATTGATTTTTGCTGGTAAACAACTGGAGGATGGTCGTACTCTTTCCGACTACAAC 78453
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || || ||||| || || || | ||| | || ||||
Sbjct 78454 ATCCAAAAGGAGTCTACCCTTCACCTTGTTCTCCGTCTGCGTGGTGGTA 78502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763129189040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |