Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq449 102 6e-17
>seq449
Length=79778
Score = 102 bits (112), Expect = 6e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977
||||||||| | ||||| ||||| | ||||| | || |||| |||||| || |||||
Sbjct 78465 CTCCTTTTGGATGTTGTAGTCGGAAAGAGTACGACCATCCTCCAGTTGTTTACCAGCAAA 78406
Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTC 43036
||||||||| || ||||| | || | |||||| || || ||| ||| | | || ||
Sbjct 78405 AATCAATCGTTGCTGATCAGGAGGAATACCTTCCTTGTC-CTGAATCTTCGCCTTAACGT 78347
Query 43037 TGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096
|| | | ||||| | |||||| || | || ||||| |||||||| | ||| || |
Sbjct 78346 TGTCGATAGTGTCAGACGACTCGACTTCAAGAGTGATAGTCTTTCCGGTCAAAGTCTTGA 78287
Query 43097 CAAAAATTTGCAT 43109
|||| || |||||
Sbjct 78286 CAAAGATCTGCAT 78274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381366871658046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |