Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 55.1_202017-07-20] 587 sequences; 18,505,623 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq449 86.0 1e-11 >seq449 Length=79778 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 243535 TTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594 ||||||| |||||| | || | ||||| || |||||| | | |||||| | || Sbjct 63412 TTCATTTAAGACGCTCTCCCCGTCTCTCTTATCGGTATGAACGCCAAGCTCATGTGCCAA 63353 Query 243595 TACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAAC 243654 ||||| || || || |||||||| || | | || | || | ||||| | | ||| Sbjct 63352 TACATTGAGTTTGTTGCCGACCGTCTTCTTGTTGCTTTGGGCAACGAGAAGATTTGGAAC 63293 Query 243655 TCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTC 243714 || ||||||||||| |||||||||| | || || || ||||| || | ||||| ||| Sbjct 63292 TCTGCGAACCCCTTTGACTTTATGGAGATGATCTCTCTCCAAGGCAAGGCCAACTTTTTC 63233 Query 243715 GA 243716 || Sbjct 63232 GA 63231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102871705308450