Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq185 167 3e-36
seq449 122 1e-22
seq90 111 2e-19
>seq185
Length=108970
Score = 167 bits (184), Expect = 3e-36
Identities = 713/1116 (64%), Gaps = 27/1116 (2%)
Strand=Plus/Minus
Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162
|||||| || |||| |||||||| | ||| || || || || | | || || |
Sbjct 95670 CCACATGTCGTACTGAAGGATACCCTTAGAGATGGGAGAACCTTCGTAAGATTCATAGGT 95611
Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222
|| |||| || | |||| | |||||| || || ||||| || || ||||| ||
Sbjct 95610 ACCAAACTCCTCGGCAAGTTCGCACGACGCCTCAAGTGCCGCGTGGTATATCGTCTCGAA 95551
Query 114223 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAA 114282
|| | ||| | | || | ||||| |||| || |||| | || || ||
Sbjct 95550 GATCTGGATATTGAGTTCCCTAGCCTCAGCGGAGTCGAACGGCATGCGAAGGGCCATGAA 95491
Query 114283 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 114342
| || || ||||| |||||||| || |||| || ||||| | ||| || || || ||
Sbjct 95490 AGCGTCGGCAAGACCCTGGACACCAAGACCAACAGGTCGATGGCGCATGTTGGAGTTGCG 95431
Query 114343 AGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399
|| ||| ||| ||||| | || | ||| || | | || || || || ||
Sbjct 95430 GGC---CTCAGGCACTGGATAGTAGTTACGGGTGATTACAGTGTCAAGGTTCTTTGTAAC 95374
Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 114459
|||||| || || || || ||||||| | | ||| | |||| || | || |
Sbjct 95373 AACCTTGGTAATCTCGTGCAGCTTTTTGAAGTCATAGACGCGACGTTCAAGGTCTACGAA 95314
Query 114460 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 114519
|||||| || | || || |||||||| |||| ||||| | || |||||
Sbjct 95313 GGCAGGAAGAGCAAGAGAAGCAAGATTACAGACAGCAACTTCATCAGGAGAAGAATACTC 95254
Query 114520 TATAATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577
|| ||||| ||||| | || || | | | ||||| || | || |||||| || |||
Sbjct 95253 CATGATTTCAGTACAGAGGTTACTGGATT--TGATGGTACCAAGGTGCTTTTGGTTGGAC 95196
Query 114578 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 114637
|| | ||| ||||||||||| ||||| || || ||||| ||||| | || |
Sbjct 95195 TTGGAGTTGGCAGCATCCTTGTAGCAGATGTAAGGGACACCAGTCTCGGTTTGAGCCTCG 95136
Query 114638 AGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGG-CGTTGGCTCGCCCCTCCTCCT 114695
|| || || ||| | | || | |||| | ||| | || || |||| |||| |
Sbjct 95135 AGGATGGCGAACCAAAGCTTCTG-GGCTTTGATAGTTTTCCTTCCCTTGCCCTGCCTC-T 95078
Query 114696 CGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCT 114755
|||| | || || |||||| |||||||| | || | || || || ||
Sbjct 95077 CGTAGCTCTCATAAAGCTTTTCAAATTCTTCACCGTAAACGTCGGCAAGTCCAGGGCACT 95018
Query 114756 TATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTG 114815
| || || | |||| ||| | ||| | || |||||||||||||| || || |
Sbjct 95017 CGGCGGGACACATAAGAGTCCAATCCCCATCGGATTCGACACGCTTCATGAAAAGATCGG 94958
Query 114816 GGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGAC 114875
||||||||| || |||| ||||| ||| || | || || | || || || |
Sbjct 94957 AGATCCAGAGGGCGTAGAAAAGATCACGAGCTCGTACCTCCTCCTTACCATGGTTCTTCC 94898
Query 114876 GCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC 114935
|| || | ||||| | | ||| |||||||| || || || || | |||| | |
Sbjct 94897 TTAAGTCAATGAAGTCAAATACATCAGCGTGCCAAGGCTCAAGATAGATGGCGAAGGCAC 94838
Query 114936 CCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAA 114989
| | |||| |||| | || | || || | |||||||| | | | || |
Sbjct 94837 C---AGGACGCTTGTTACCACCTTGATCAACGTATCGAGCTGTGGCGTCGTAAGCTCGGA 94781
Query 114990 GCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGC 115047
|||| |||||||| || | || | ||||| || || || || ||| | || ||
Sbjct 94780 GCATAGGAATGATGCCGTTGGAGTAACCATTGGTACCGGCAATGTAGGAGCC--CTTCGC 94723
Query 115048 TCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTC 115107
| || || || ||||| | ||||||||| || || ||| ||||| || || ||
Sbjct 94722 ACGGATATTGTGAATGTGAAGACCAATACCACCGGCAGTCTTGGAGATCTGAGCACAGGT 94663
Query 115108 CGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCT 115167
| ||||| | ||||||| || || || |||||| |||| | || | ||||||||
Sbjct 94662 CTTGAGAGTATCGTAGATACCATCAATGGAGTCATCCTTCATGGCCACGAGGAAGCATGA 94603
Query 115168 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203
|||||||| || | || ||||| |||||||| ||
Sbjct 94602 TGACATTTGGGGTCGGGGAGTACCGGCGTTGAAAAG 94567
>seq449
Length=79778
Score = 122 bits (134), Expect = 1e-22
Identities = 121/154 (79%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||||||||||||||| || |||||||| || || |||||| || ||
Sbjct 63551 GGCAAAGTCGGTGTGGAGACCCTCGTCTCGAGAGATGAGCTCGTTAGAGAAGGTGAGACC 63610
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAGA 126164
||||||||||| |||||||| | |||||| || | | | ||| ||||| ||||||||||
Sbjct 63611 AGGCATGAGACCTCGCTTCTTAAGCCAGAAGATGGACGCGAAA-GAACCAGAGAAGAAGA 63669
Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTC 126198
| |||||||| || || |||| ||| |||||
Sbjct 63670 TACCCTCCACGGCAGCAAAAGCAATGAGTCGCTC 63703
>seq90
Length=80925
Score = 111 bits (122), Expect = 2e-19
Identities = 286/428 (67%), Gaps = 6/428 (1%)
Strand=Plus/Plus
Query 171727 ACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAA 171786
||| || || ||||| || | || || | | |||||||||| || ||||| | |
Sbjct 70451 ACCAGTACCGATACCATCTGCACCATTGATCAATACCATTGGAACGGTGGGCATGAAATA 70510
Query 171787 GTCTGGTTCAAT-CGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845
||||||||||| |||| || ||| || |||| |||||||||| ||| || |
Sbjct 70511 ATCTGGTTCAATGCGCATACC-ATCCTCGACCAAGTAGTTGAGCAACCCGTCATCTGCAG 70569
Query 171846 GATCAAAGATTTTACGAG-CATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGAC 171904
| | |||||| |||| ||||| ||| || ||||||||||| || | | ||
Sbjct 70570 GGTGGAAGATTGCTCGAGTCATCCGTGGA-AGGTTTGTGAAGATATAACGAGCAGAAGCT 70628
Query 171905 GCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATA 171964
|| ||||| ||||| ||||| || |||||||| || || || || ||||||||
Sbjct 70629 GCGTCTTTACCACCTGCAAGACGAGTACCAAATTGGCCGTTGGGATCCAGCAGATTGATG 70688
Query 171965 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 172024
||||| || | | ||| | || || |||||| || | | | |||||
Sbjct 70689 TTGTTACTGCCGACGAAGTTTTGTGCTAAACCGACAATGGTGGAAGTCAAACTGGCTTCA 70748
Query 172025 CCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAA-CTGTGCCACCTTCATCTC 172083
|| || ||||| || | || |||| || || |||| ||| ||| || ||||| || ||
Sbjct 70749 CCATGGTGGTATGCGGTTTTCTCCGAAACGTA-GCCGGCAAGCTGAGCGACCTTGATTTC 70807
Query 172084 ATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCC 172143
| ||||||| | ||| || || | | ||||||| ||| ||| ||||| ||
Sbjct 70808 TTTGGTGAGGTTTCGCTTGAAACAACCAAAGAGAACCTTTCGCTGACCAGGTTTGAGACC 70867
Query 172144 GTCGGCCA 172151
||||||||
Sbjct 70868 GTCGGCCA 70875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597349216917960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |