Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq449 111 2e-19
>seq449
Length=79778
Score = 111 bits (122), Expect = 2e-19
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | ||| | || | | | ||||||||||| ||||||||||||
Sbjct 78500 CCACCACGCAGACGGAGAACAAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGAA 78441
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| ||||| ||||||||||| | | | || | || || || || |||||
Sbjct 78440 AGAGTACGACCATCCTCCAGTTGTTTACCAGCAAAAATCAATCGTTGCTGATCAGGAGGA 78381
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | || | |||| ||| || | ||||| | |||||| |
Sbjct 78380 ATACCTTCCTTGTC-CTGAATCTTCGCCTTAACGTTG-TCGATAGTGTCAGACGACTCGA 78323
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || || || |||| ||| || ||||| ||||||||
Sbjct 78322 CTTCAAGAGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 78274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496258758674640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |