Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq449 174 3e-38
seq185 102 2e-16
>seq449
Length=79778
Score = 174 bits (192), Expect = 3e-38
Identities = 185/244 (76%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182
|||| | ||||||||||| |||| | || ||||| || ||||||| |||| ||||
Sbjct 63541 AGAGGAGACAGGCAAAGTCGGTGTGGAGACCCTCGTCTCGAGAGATGAGCTCGTTAGAGA 63600
Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242
|| |||||||||||||| || | || || |||||||| || | ||||||||| ||||
Sbjct 63601 AGGTGAGACCAGGCATGAGACCTCGCTTCTTAAGCCAGAAGATGGACGCGAAAGAACCAG 63660
Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302
|||||||||| |||||||| || || || || |||| | ||| |||||| ||| || |
Sbjct 63661 AGAAGAAGATACCCTCCACGGCAGCAAAAGCAATGAGTCGCTCGCCGAAACAAGATTTTT 63720
Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362
||| |||||||| ||| |||||||| |||||||| ||| || || || || || |
Sbjct 63721 GGTCAGAGATCCATCGAAGAGCCCAGTCGGCCTTCTTTCGGATACAAGGAATGGTGTCCA 63780
Query 48363 TGGC 48366
| ||
Sbjct 63781 TAGC 63784
>seq185
Length=108970
Score = 102 bits (112), Expect = 2e-16
Identities = 286/436 (66%), Gaps = 5/436 (1%)
Strand=Plus/Minus
Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTT 213590
||||||||||| || || || ||||| ||| || |||||| || |||| || |||||
Sbjct 95258 TACTCCATGATTTCAGTACAGAGGTTACTGGATTTGATGGTACCAAGGTGCTTTTGGTTG 95199
Query 213591 GACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650
||||| | |||||||| |||||||||| ||||| ||| || ||||| || | |
Sbjct 95198 GACTTGGAGTTGGCAGCATCCTTGTAGCAGATGTAAGGGACACCAGTCTCGGTTTGAGCC 95139
Query 213651 ACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTA 213710
| || || | ||| || | | ||| |||| ||| | || || |
Sbjct 95138 TCGAGGATGGCGAACCAAAGCTTCTGGGCTTTGATAGTTTTCCTTCCCTTGCCCTGCCT- 95080
Query 213711 GCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA 213770
|||||| || || |||| | ||||| | || | || | | ||||| ||
Sbjct 95079 --CTCGTAGCTCTCATAAAGCTTTTCAAATTCTTCACCGTAAACGTCGGCAAGTCCAGGG 95022
Query 213771 CAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGG 213830
|| ||||||||||| || |||| ||||| || | ||| | || |||||| ||
Sbjct 95021 CACTCGGCGGGACACATAAGAGTCCAATCCCCATCGGATTCGACACGCTTCATGAAAAGA 94962
Query 213831 TCCGGGACCCACAGCGCGGTGAACAGGTC-CCTGGTCCTCCTCTCGTCCACTCCAGAGTT 213889
|| | || ||| || ||| ||| || || | | || | | ||| ||| ||| |||
Sbjct 94961 TCGGAGATCCAGAGGGCGTAGAAAAGATCACGAGCTCGTAC-CTCCTCCTTACCATGGTT 94903
Query 213890 TTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAA 213949
|| | | || | |||||||| | || |||||||| ||||| | |||||||| ||
Sbjct 94902 CTTCCTTAAGTCAATGAAGTCAAATACATCAGCGTGCCAAGGCTCAAGATAGATGGCGAA 94843
Query 213950 GGCGCCCGGCCTCTTG 213965
||| || || | ||||
Sbjct 94842 GGCACCAGGACGCTTG 94827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931525964878080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |