Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq90 96.9 3e-15
seq449 87.8 2e-12
>seq90
Length=80925
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||||||||||||||| || ||| | || | ||||||||||| || ||||| || |||||
Sbjct 51489 GTCCTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCAGGGGGGATACCCTCCTT 51548
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | || | ||||||| || ||| || |||| |||||
Sbjct 51549 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGAT 51608
Query 133625 GGTTTTGCCGGTCAGA 133640
||| || ||||| |||
Sbjct 51609 GGTCTTTCCGGTAAGA 51624
>seq449
Length=79778
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| || || |||||||||||| | || | | | || || || |
Sbjct 77970 ATGGAGGGTAGACTCCTTTTGGATATTGTAATCGGAAAGAGTTCGGCCA-TCTTCAAGTT 77912
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| || || ||| | ||||| || ||||| || || ||||| || |||||||| |||||
Sbjct 77911 GTTTTCCGGCGAAGATGAGTCGTTGCTGATCAGGGGGGATACCCTCCTTGTCTTGGATCT 77852
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | || | || || | | || || || | ||| | |||||||||||
Sbjct 77851 TGGCCTTGACATTGTCGATGGTATCAGAGCTTTCGACTTCAAGGGTAATGGTTTTGCCGG 77792
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| ||||| || |||||
Sbjct 77791 TGAGGGTTTTGACGAAGATTTGCAT 77767
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || || ||||| || ||| | || | || || ||||| |||||||| || ||||||
Sbjct 78149 TCTTCCAGTTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCCTCCTTG 78090
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||| ||||| | |||| ||||| | || || || || | ||||
Sbjct 78089 TCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCAGAGGATTCAACCTCAAGAGTGATA 78030
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||| || ||||||||||||||
Sbjct 78029 GTCTTTCCGGTAAGAGTCTTGACGAAAATCTGCAT 77995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417252899880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |