Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq449 107 2e-18
>seq449
Length=79778
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| | ||||| ||| | || || | ||||||||| |
Sbjct 77767 ATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCTCT 77826
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || || || || || || |||||||| || || ||||||
Sbjct 77827 GATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAG 77886
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| ||||||| | || ||| |||||||| ||||||| ||| | | ||||||||||
Sbjct 77887 CAACGACTCATCTTCGCCGGAAAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAAT 77946
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
|| ||||| || || ||| | ||| | || ||
Sbjct 77947 ATCCAAAAGGAGTCTACCCTCCATCTCGTCTT 77978
Score = 102 bits (112), Expect = 7e-17
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 25211 ATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGAT 25270
||||| | ||||||||| | | |||||| ||||| | || || || || ||
Sbjct 78591 ATCACTCTTGAAGTCGAATCGAGCGATACCATCGACAACGTCAAGGCCAAGATCCAAGAC 78650
Query 25271 AAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 25330
|| |||||||| || || ||||||||| ||||||| | || ||| |||||||| ||||||
Sbjct 78651 AAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGAAAACAACTTGAAGAT 78710
Query 25331 GATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
| ||| | | |||||||||||| ||||| || || ||| | ||| | || ||
Sbjct 78711 GGCCGAACTCTTTCCGATTACAATATCCAAAAGGAGTCTACCCTCCATCTCGTCTT 78766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445091134119840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |