Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq449 87.8 1e-12
>seq449
Length=79778
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || ||||| || || || ||| ||||| |||| ||||||||| |
Sbjct 77767 ATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAAAGCTCT 77826
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || ||||| ||||| || || ||||| || ||| | || || |
Sbjct 77827 GATACCATCGACAAT--GTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATC 77884
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||||| | || || |||||||||||| | || || | || | | ||||||||||
Sbjct 77885 AGCAACGACTCATCTTCGCCGGAAAACAACTTGAAGATGGCCGAACTCTTTCCGATTACA 77944
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| |||||||| ||| || | ||| | || |||||| | || || ||
Sbjct 77945 ATATCCAAAAGGAGTCTACCCTCCATCTCGTCTTGCGTCTCCGAGGTGG 77993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355859854138149
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |