Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 65.1_202017-07-20] 497 sequences; 18,521,151 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq282 235 7e-57 seq317 221 2e-52 seq103 196 6e-45 seq286 188 9e-43 seq57 187 3e-42 seq285 140 4e-28 seq461 113 6e-20 seq68 113 6e-20 seq9 109 7e-19 seq380 95.1 2e-14 >seq282 Length=65481 Score = 235 bits (260), Expect = 7e-57 Identities = 269/359 (75%), Gaps = 2/359 (1%) Strand=Plus/Plus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 ||||||||||||| || || ||||| | || ||||||||||||||||| || ||| | Sbjct 64837 CTCCCGAAGAAATCTCTTCCATGGTCCTTATCAAGATGAAGGAGACTGCTGAGGCTTACC 64896 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | ||| || || | || ||||| || || || || ||||||| || || |||| Sbjct 64897 TTGGTGGCACCGTCTCCAAGGCCGTTGTCACCGTCCCCGCCTACTTCAACGACTCTCAAC 64956 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAAT 195808 | ||||| || |||||||||| ||| ||||| ||||| | ||| || | || ||||| Sbjct 64957 GTCAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAAC 65015 Query 195809 GAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAAT 195868 || || || || ||||| || ||||| ||||| |||||||| || | || || || Sbjct 65016 GAGCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCCGAGGGCGAGAAGAAC 65075 Query 195869 GTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGT 195928 || |||||||| || || ||||||||||| || || ||||| ||| | | |||||| | Sbjct 65076 GTTTTGATCTTCGACCTTGGTGGTGGTACTTTCGACGTCTCTCTTTTGACTATTGAGGAG 65135 Query 195929 GGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || |||||||| |||||||| ||||| || |||||||| || || || Sbjct 65136 GGTATCTTCGAGGTCAAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 65194 >seq317 Length=80037 Score = 221 bits (244), Expect = 2e-52 Identities = 187/230 (81%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| |||||||| || || | || ||||| |||||||| ||||| || ||||||| Sbjct 78545 GTATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACTCTCGAAGTCGAGTCGT 78604 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| | || || |||||||| || |||||||| ||||| || |||| Sbjct 78605 CTGACACTATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGATC 78664 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||||| | ||||||||||||||||| ||||| ||||| ||||| || | || |||| Sbjct 78665 AGCAACGATTGATTTTTGCTGGTAAACAACTTGAGGATGGTCGTACTCTTTCCGACTACA 78724 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | |||||||| ||||| || ||||||||||| | || || |||||| Sbjct 78725 ACATCCAAAAGGAATCTACCCTTCACCTTGTTCTCCGTCTGCGTGGTGGT 78774 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || |||||||| || || ||||| || ||||| || || || ||| Sbjct 78038 GTATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAATCGA 78097 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 || || ||||| || |||| |||||||| ||||| ||||| || || || || || | Sbjct 78098 GCGATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACC 78157 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| ||| | ||||| || || || || |||||||| || || || || | ||||||| Sbjct 78158 AGCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACA 78217 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | | ||||||||||| ||||| || || || | | || || |||||| Sbjct 78218 ATATCCAAAAGGAGTCCACTCTCCATCTCGTCTTGCGTCTCCGAGGTGGT 78267 Score = 149 bits (164), Expect = 8e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| || || || ||||| || || || || ||| || || ||||| || |||| Sbjct 78849 CTTACGGGTAAGACAATCACTCTTGAAGTCGAATCGAGCGATACCATCGACAATGTCAAG 78908 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| ||||| ||||| || || || || |||||||||||||| || || || || Sbjct 78909 GCCAAGATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGA 78968 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 ||||| ||||||||||| || || || | |||||||| ||||||||||||| ||||| Sbjct 78969 AAACAACTTGAAGATGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTCCACTCTC 79028 Query 172063 CACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | | || || |||||| Sbjct 79029 CATCTCGTCTTGCGTCTCCGAGGTGGT 79055 Score = 141 bits (156), Expect = 1e-28 Identities = 138/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || || || || || || |||||||| || || || ||||| || Sbjct 77761 ATGCAAATTTTCGTCAAGACTCTCACCGGTAAGACTATCACTCTTGAAGTGGAGTCTTCC 77820 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| || || ||||| || || || || || ||| Sbjct 77821 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 77880 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||||| | || ||||||||||| |||||||||||||| | || ||| | || |||| Sbjct 77881 CAACGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTCTCCGACTACA 77938 >seq103 Length=98028 Score = 196 bits (216), Expect = 6e-45 Identities = 567/859 (66%), Gaps = 19/859 (2%) Strand=Plus/Plus Query 78068 TTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAG 78127 || || || ||||||||||| || || |||||||| || ||||| | || | ||||| Sbjct 83636 TTCAACGCCGGTACTCCCCGACCCCAAATGTCATCATGCTTCCTCGTGGCCATGAAGGAT 83695 Query 78128 GACTCTATTAATGGTATATACGGGACTCTCACAGA-GTGTGCTCAGATTTCTAAGTGGGC 78186 ||||| ||| ||||||| |||| ||||||| ||| ||||||||||| || ||| || Sbjct 83696 GACTCCATTGATGGTATCTACGATACTCTCA-AGACCTGTGCTCAGATCTCCAAGACTGC 83754 Query 78187 TGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAAC 78246 |||||||| |||||||| |||||| || | ||||| || ||| ||| || || Sbjct 83755 CGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTAC 83814 Query 78247 TAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTA 78306 |||||| | || | || || ||||||||||| | | | | | || ||||| || || Sbjct 83815 CAATGGTTACTCCAACGGCATCATTCCTATGCTCCGAGCTTACGACGCCACAGCTCGATA 83874 Query 78307 TGTCAACCAAGCGGGTCGTAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTG 78360 || | ||| ||| ||| ||| || | ||||| || || ||||| ||||| Sbjct 83875 CGTTGATCAA---GGTGGTAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCTTG 83931 Query 78361 GCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCG 78420 |||||| |||||| | || || | || | | ||||| ||| | ||||| | || Sbjct 83932 GCACGCTGATGTATTTGACTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACG 83991 Query 78421 ATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGA 78480 | | ||| | ||| || | ||||| | |||||||| |||||| | || || Sbjct 83992 AGCTCGTGATCTTTTCTACGCCCTCTGGATCTCCGATCTTTTCATGAAGCGTGTCGAATC 84051 Query 78481 AGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGG 78540 | || | ||| ||||| | ||||| | || || ||| | || || ||||| Sbjct 84052 CGATGGGGATTGGACTCTTATGTGTCCCGCCGAGTGCCCTGGACTTGCCGACGTTTACGG 84111 Query 78541 GGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTC-TCGCTATTAAGACAA 78599 |||||||| ||||| | || | |||| ||||| ||| | | | || || | Sbjct 84112 TGAAGAATTTGAAAAGCTTTATGAGAGCTACG-AGAGGCAGGGCAAGGGAAGGAAAACTA 84170 Query 78600 TTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCG 78658 | | || | ||| || ||| || || || | |||||| ||||| || ||| Sbjct 84171 TCAAAGC-CCAGAAGCTTTGGTTCGCCATCCTCGAGGCTCAAACCGAGACTGGTGTCCCT 84229 Query 78659 TATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCAT 78717 || || ||||| || |||| ||| ||||| ||||||||| |||| ||| ||| Sbjct 84230 TACATCTGCTACAAGGA-TGCTGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCAT 84288 Query 78718 CAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGT 78777 |||| | |||||| || || ||||| |||| || | | ||||| ||||| Sbjct 84289 CAAATCCAGTAACCTCTGTACTGAAATCATGGAGTATTCTTCTCCTGATGAAGTTGCTGT 84348 Query 78778 ATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAA-TTAAAGACATTTG 78836 |||||||| | ||| | ||||| || || || || | ||| | | | | || Sbjct 84349 CTGTAATCTTGCTTCTCTTGCTCTTCCTGCCTTCGTAGACCTGGAACGTCGCGTC-TATG 84407 Query 78837 ATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTG 78896 | | |||||| ||||| ||||| || | || || || || | | |||||| Sbjct 84408 ACTTCAAAAAGCTGCACGAGATTACCAAGGTTGTTACAAAGAACCTTGACACTGTAATCA 84467 Query 78897 ACCGTAACTACTACCCAGT 78915 |||||||||||| ||||| Sbjct 84468 CCCGTAACTACTATCCAGT 84486 >seq286 Length=11016 Score = 188 bits (208), Expect = 9e-43 Identities = 234/318 (74%), Gaps = 2/318 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || ||||| ||||| || ||||| | | |||||||||||||||||| || ||| | | Sbjct 317 CCTGAAGAGATTTCTTCCATGGTTCTTACTAAGATGAAGGAGACTGCTGAGGCTTACCTC 258 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||| || || | || ||||| || || || || ||||||| || || ||||| Sbjct 257 GGTGGCACCGTCTCCAAGGCCGTTGTTACCGTCCCCGCCTACTTCAACGACTCTCAACGT 198 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810 ||||| || |||||||||| ||| ||||| ||||| | |||| | | || ||||| || Sbjct 197 CAGGCTACCAAGGACGCTGGTGCCATTGCCGGTCTCGA-TGTCCTCCGTATCATCAACGA 139 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT 195870 || || || ||||| || ||||| ||||| |||||||| || | || || || || Sbjct 138 GCCTACTGCCGCTGCTATCGCTTACGGTCTTGACAAGAAGTCTGAGGGCGAGAAGAACGT 79 Query 195871 ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGG 195930 |||||||| || || ||||||||||| || || ||||| ||| | | |||||| | || Sbjct 78 TTTGATCTTCGACCTTGGTGGTGGTACTTTCGACGTCTCTCTTTTGACTATTGAGGAGGG 19 Query 195931 TATATTCGAAGTAAAGGC 195948 ||| ||||| || ||||| Sbjct 18 TATCTTCGAGGTCAAGGC 1 >seq57 Length=33664 Score = 187 bits (206), Expect = 3e-42 Identities = 475/717 (66%), Gaps = 12/717 (2%) Strand=Plus/Plus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || | || || |||||||| | ||| ||||| Sbjct 14818 GTTCCTGCCTACTTCAACGACTCTCAGCGTCTCGCCACTAAGGACGCCGGTGCCATTGCC 14877 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| | || | |||||||| ||||| || || || || ||||| || ||||| Sbjct 14878 GGTCTTGAGGTGCTCCGTATTATCAACGAACCTACTGCTGCCGCTATTGCCTACGGTCTT 14937 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||| |||| | || || || ||| || | ||||| || | ||||||||||| || Sbjct 14938 GACGAGAAGACCGAGGAGGAGCGAAACGTCCTCATCTTCGACTTGGGTGGTGGTACTTTC 14997 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| ||||| | ||| | || | ||| || ||||| ||||||||||| Sbjct 14998 GATGTCTCTCTTCTTACCATTCAGGGCAAGGTCTTCTCTGTCAAGGCCACTGCTGGTGAC 15057 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT---CATTTGTCTGATGAG 196018 |||||||| |||||||| || ||||| || | |||| | || || | |||| Sbjct 15058 ACTCATCTTGGTGGTGAGGACTTCGA-CAACAAC--CTCCTTGAGCACTTCAAGGCTGAG 15114 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| | |||| ||| || || |||| | | | ||| | || || | || Sbjct 15115 TTCAAGAGGAAGACCAAGCTTGACATCTCTGACGACGCCCGTGCTTTGCGACGATTGAGA 15174 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 |||| ||||| ||||| || |||||||||||||| |||| || | || ||| | Sbjct 15175 TCTGCTTGTGAGCGTGCTAAGCGAACTCTCTCTTCCGTTACTCAGACCACCGTCGAGGTC 15234 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 || || | | | || | ||||||| | | | || |||||||| | || || ||| Sbjct 15235 GACTCTCTCTACCAGGGTACCGACTTCTCTTCCAACATCACCCGTGCTAGGTTCGAGGAG 15294 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGAC 196255 | ||| | | | | || |||| || | || || || || | || || ||| Sbjct 15295 ATCAACGCCG--TCGCTT-TCAAGTCTACCGTTGACCCCGTAGAGAAGGTCCTCAAGGAC 15351 Query 196256 GCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATT 196315 | ||||| | | |||||||| || ||||||||||| || || || |||||||| Sbjct 15352 TCCAAGATCCCTGCCGCCAAGGTTGACGACATTGTCCTTGTTGGTGGTTCTACCCGTATC 15411 Query 196316 CCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATC 196375 || ||||| ||| | | || | ||| | | | | ||||| | ||| Sbjct 15412 CCCAAGATCCAATCTCTCGTCTCCGAGTACTTTGGTGGTCGTCAGCTCAACAAGTCCATC 15471 Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 ||||| || || || |||||||| ||||| ||||| |||||||| | ||| | ||| Sbjct 15472 AACCCCGACGAGGCTGTTGCTTACGGTGCCGCCGTCCAGGCTGCCGTCCTCACCGGT 15528 >seq285 Length=39979 Score = 140 bits (154), Expect = 4e-28 Identities = 400/614 (65%), Gaps = 6/614 (1%) Strand=Plus/Minus Query 196226 ATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAA 196285 ||||| || || || | || || || ||| | ||||| || ||||| ||| | || Sbjct 39958 ATGGACCCCGTCGAGAAGGTTCTCCGAGACTCCAAGATCGACAAGTCCTCCGTTAACGAG 39899 Query 196286 ATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTC 196345 || |||||||| || || || |||||||| || ||||| || || | |||| | | Sbjct 39898 ATCGTCCTTGTCGGCGGTTCCACCCGTATCCCCAAGATCCAGAAGCTTGTTTCCGACATG 39839 Query 196346 TTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCG 196405 ||| | ||| |||| | |||||||| || || || || || |||||||| Sbjct 39838 TTCTCTGGCCGAGAGCCCAACAGGTCCATCAACCCCGACGAGGCTGTCGCCTATGGTGCC 39779 Query 196406 GCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTC---CAAGATCTTCTG 196462 ||||| ||||||||||| || | |||| ||| | | | | | || || | || Sbjct 39778 GCCGTCCAGGCTGCTATCCTTACTGGTG---ACACTTCTGAGGCCACTCAGGACTTGCTC 39722 Query 196463 CTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAA 196522 | || || ||||| || | ||| ||||| | || || || |||||| | ||||| Sbjct 39721 TTGCTCGACGTTGCTCCTCTTTCCATGGGTATCGAGACTGCTGGTGGTATCATGACCCCC 39662 Query 196523 ATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCC 196582 | || | |||||||| ||| | || || |||||| ||||||| || || || || Sbjct 39661 TTGATCAAGAGGAACACCACTGTCCCCACCAAGAAGTCTGAAGTCTTCTCTACCTACTCT 39602 Query 196583 GATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGAT 196642 || || || || ||||| || || || | || || || || | | ||||| Sbjct 39601 GACAACCAGCCTGGTGTCTTGATCCAGGTCTTCGAGGGTGAGCGAGCTAAGACTAAGGAC 39542 Query 196643 AACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCA 196702 | | | || || | || || || | || ||||| | || || ||||||| || Sbjct 39541 TGCAACTTGCTCGGCAAGTTTGAATTATCCGGTATTCCTCCGGCCCCACGAGGTGTCCCT 39482 Query 196703 CAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGAC 196762 || || | || | ||| || || ||||| || || || | ||||| | || | ||| Sbjct 39481 CAAATCGAAGTGTCCTTTGACATTGACGCCAACGGTATCTTGAACGTTAACGCCGCCGAC 39422 Query 196763 AAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAG 196822 || || | || || | ||||| || |||||||||||||| | | || || Sbjct 39421 AAATCTACCGGTAAGACCAGTAAGATCACCATCACCAATGACAAGGGTAGATTGTCCAAA 39362 Query 196823 GAGGAAATTGAACG 196836 |||||||||||||| Sbjct 39361 GAGGAAATTGAACG 39348 >seq461 Length=152960 Score = 113 bits (124), Expect = 6e-20 Identities = 282/417 (68%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 198539 TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCT 198598 ||||||| ||| || || |||||| | || ||||| |||||||||| ||||| || || Sbjct 12274 TGGTGCCAAAATTCCTCGGGGTGCTATCCTTTCCGGTCCCCCGGGTACCGGTAAGACTCT 12215 Query 198599 TCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTCTT-CAGTGCTCCGCGGC-G 198656 ||| || |||| ||| || ||| | |||| || || ||| | || ||| | | | Sbjct 12214 TCTCGCCAAGGCTACCGCCGGAGAAGCTGGTGTGCCTTTCCTTTCCGT-CTCTGGTTCTG 12156 Query 198657 AGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAA 198716 |||| | |||| ||||| || || || ||| | || ||||| || | || | | Sbjct 12155 AGTT-CGTCGAAATGTTTGTCGGCGTCGGTCCCTCCCGAGTCCGTGACTTGTTCGCAAAC 12097 Query 198717 GCACGTGAA-AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAA 198775 || | ||| ||| ||||||||||||||| ||||||| || ||||| | || ||| Sbjct 12096 GC-CAAGAAGAATGCCCCATGTATCATCTTCGTTGATGAAATCGACGCCATCGGCAAGTC 12038 Query 198776 GCGTGG------TGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGACGATTAACCA 198829 ||||| ||| | ||| |||||| ||||||||||| || | ||||| Sbjct 12037 CCGTGGCAAGGGTGGCA--ACTTTGG-TGGTAACGATGAGCGTGAATCCACTTTGAACCA 11981 Query 198830 GCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTATCGTGGTGATTGCTGC 198886 |||| | || ||||| ||||| | ||| ||| | |||| || | |||| Sbjct 11980 GCTTTTGGTCGAAATGGACGGTTTCGGTACCAACGAGCACG---TCGTCGTTTTGGCTGG 11924 Query 198887 TACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCCCGGTCGATTCGACCG 198943 ||| || || |||| |||| ||| ||| | | ||||| |||||||||||||| Sbjct 11923 TACGAACAGACCTGATGTCCTTGATTCTGCCTTAATGCGTCCTGGTCGATTCGACCG 11867 >seq68 Length=80302 Score = 113 bits (124), Expect = 6e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || |||||||||||||||||||| || ||||| ||||| || |||| Sbjct 65451 CTTACCGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTCAAG 65392 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 ||||||| || || ||||| || || || || || || || ||| | || || || || Sbjct 65391 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGATTGATCTTCGCCGGA 65332 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || ||||| || || || | ||||| |||| |||| Sbjct 65331 AAGCAGCTCGAGGACGGCAGGACCCTTTCTGACTACA 65295 >seq9 Length=29258 Score = 109 bits (120), Expect = 7e-19 Identities = 195/281 (69%), Gaps = 14/281 (5%) Strand=Plus/Plus Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 |||| | ||||| ||||||||||||| || || || || ||||| || ||||| |||| Sbjct 15467 CAGTCATCACTGTCCCTGCTTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCTG 15526 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 |||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 15527 GCTCTATCGCTGGTCTTGAAGTCCTTCGTGTCATCAACGAGCCTACTGCCGCTGCTCTTG 15586 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG--ATCTTTGATCTCGG 195888 | |||||||| ||||||||| || || | || |||| ||| || | || Sbjct 15587 CCTATGGTCTCGACAAGAACGAGTCCGCGG-------TG-ATTGCTGTCTACGACTTGGG 15638 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAG 195946 ||||||||| || ||| |||| | || | || |||| ||| | ||||| || ||| Sbjct 15639 TGGTGGTACTTTCGATATCTCGATCCTTGAGATGCAGAAG--GGTGTTTTCGAGGTCAAG 15696 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| ||||| || || || ||||||||||| ||||| Sbjct 15697 TCTACCAACGGTGACACCCACCTTGGTGGTGAAGACTTCGA 15737 >seq380 Length=45650 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 || || ||||||||||| || |||||||| || ||| |||||| | ||| | || || Sbjct 18596 GACCTTGGTGGTGGTACTTTCGATGTCTCTCTCCTCTCTATTGAGGACGGTGTCTTTGAG 18537 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||||||||||||| ||||| || |||||||| |||||||| Sbjct 18536 GTCTTGGCTACTGCTGGTGACACTCACCTTGGTGGTGAGGATTTCGA 18490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858313029840