Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq900 111 1e-19 >seq900 Length=79834 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || || ||||| ||||| || ||| |||| || | ||||| || |||||| Sbjct 78012 TCCTTTTGGATATTGTAATCGGAAAGAGTTCGGCCGTCTTCAAGTTGCTTTCCGGCGAAA 77953 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||||||||| || | | ||||||||| ||||| ||| | || | Sbjct 77952 ATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTG 77893 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| |||||||||| || | || ||||||||||||||||| ||||| || Sbjct 77892 TCGATGGTATCGCTCGATTCGACTTCAAGGGTAATGGTTTTGCCGGTGAGGGTTTTGACG 77833 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 77832 AAGATTTGCAT 77822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067495568640