Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq900 84.2 2e-11 >seq900 Length=79834 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || |||||||| ||||| || |||||||||||| | ||| || || ||| Sbjct 77822 ATGCAAATCTTCGTCAAAACCCTCACCGGCAAAACCATTACCCTTGAAGTCGAATCGAGC 77881 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | ||||| || || || || || || || || |||| ||| || Sbjct 77882 GATAC-CATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCA 77940 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | |||| || || || ||| | ||||| | | ||| | ||||||| || Sbjct 77941 GCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTCTTTCCGATTACAA 78000 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| ||||| ||| | ||| | || ||| | | ||||| || Sbjct 78001 TATCCAAAAGGAGTCCACTCTCCATCTCGTCTTGCGTCTCCGAGGTGG 78048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425338069641280