Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq247 120 3e-22
>seq247
Length=50369
Score = 120 bits (132), Expect = 3e-22
Identities = 105/131 (80%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041
||||| || ||||| ||||| || || |||||||| | |||||||||| ||||| ||
Sbjct 36819 CCCTCATCCCTACTGATCAACTCGTTCGAAAATGTCAGTCCAGGCATCAACCCTCTCTTC 36878
Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101
||||||||||| || | |||||| || ||||||||||| || ||||| || |||||||
Sbjct 36879 TTTAACCAGAAGATTGCAGCAAAAGACCCAGAAAAGAAAATGCCTTCCACGCATGCAAAA 36938
Query 19102 GCAACTAGTCT 19112
|| || |||||
Sbjct 36939 GCCACCAGTCT 36949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562100761844160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |