Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq247 105 8e-18 >seq247 Length=50369 Score = 105 bits (116), Expect = 8e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 37197 CCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttttt 37256 || ||||| ||||| ||||| || || ||||| || | ||| ||||| || ||||| || Sbjct 36819 CCCTCATCCCTACTGATCAACTCGTTCGAAAATGTCAGTCCAGGCATCAACCCTCTCTTC 36878 Query 37257 ttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAAT 37316 || | ||| || ||||| |||||||| |||||||||||||| ||||| || |||||| Sbjct 36879 TTTAACCAGAAGATTGCAGCAAAAGACCCAGAAAAGAAAATGCCTTCCACGCATGCAAAA 36938 Query 37317 GCTACAAG 37324 || || || Sbjct 36939 GCCACCAG 36946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592308329869760