Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq247 118 8e-22
>seq247
Length=50369
Score = 118 bits (130), Expect = 8e-22
Identities = 104/130 (80%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 44130 GACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATAT 44189
|||| || || |||||| |||||||||||||||||||| || || ||||| || || |
Sbjct 36948 GACTGGTGGCTTTTGCATGCGTGGAAGGCATTTTCTTTTCTGGGTCTTTTGCTGCAATCT 36889
Query 44190 TTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTC 44249
| ||||||||||| |||| ||||||||||| |||| ||||| || ||||| || |||
Sbjct 36888 TCTGGTTAAAGAAGAGAGGGTTGATGCCTGGACTGACATTTTCGAACGAGTTGATCAGTA 36829
Query 44250 GTGATGAAGG 44259
| ||||| ||
Sbjct 36828 GGGATGAGGG 36819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397450458469720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |