Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq923 91.5 1e-13
>seq923
Length=40707
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
||||| |||||||||||||||||||| |||||||| || || || ||||| |||
Sbjct 3929 AAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCGTCTGTGGCCGAGC 3988
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
|| ||| |||| || ||| || ||||| | ||||||||| ||| ||||
Sbjct 3989 CCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCATCCCAGATCCCTACGCCCTGACTA 4048
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196
|||||| | |||| || || | || |||||||||| ||||| | | |||| |
Sbjct 4049 GAGAGCACCTTGGCGTCGGTACAACCAGAAACGAACCACAAAAGCTCGGCAATGACG--C 4106
Query 30197 TTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30230
| || ||||| | |||||||| ||||| ||||
Sbjct 4107 CGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 4142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406157537069584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |