Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
75.1_202017-04-19] 1,201 sequences; 18,463,082 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq839 107 2e-18
>seq839
Length=49941
Score = 107 bits (118), Expect = 2e-18
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952
|||||||| ||||| || | ||||| |||||||| | ||| |||||||| |||| ||
Sbjct 37004 CCCTCATCCCTACTGATCAACTCGTTCGAAAATGTCAGTCCAGGCATCAACCCTCTCTTC 37063
Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCA-GCAAA 14011
|||||||| || ||||||||||| ||||| |||||||| || || || || ||| |||||
Sbjct 37064 TTTAACCAGAAGATTGCAGCAAAAGACCCAGAAAAGAAAATGCCTTCCAC-GCATGCAAA 37122
Query 14012 CGC 14014
||
Sbjct 37123 AGC 37125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479720798083400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |