Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
75.1_202017-04-19] 1,201 sequences; 18,463,082 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1012 120 2e-22
>seq1012
Length=44893
Score = 120 bits (132), Expect = 2e-22
Identities = 237/346 (68%), Gaps = 6/346 (2%)
Strand=Plus/Minus
Query 27382 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 27441
|| |||||||| || | | ||| || |||||||| ||| |||||| ||||| |||
Sbjct 37088 TTTGGGTTCCAAGCCGATAAGATAATCCGCCTGTCAGTTGGATTGTTCTTGATGGTGTCG 37029
Query 27442 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATG-TCCGTGTA 27500
| | ||||||| || || || || | || ||||| || || || |||||
Sbjct 37028 ATTACCCTTTGCAGTTGGTCGACTCCTTTGTCCTTATAGTCG-CCGTCGGCATCAGTGTA 36970
Query 27501 CTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 27560
||| || || ||||| ||||| |||||||||||||| |||||||| || || || ||
Sbjct 36969 CTCGGCACCAAAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCTTCT 36910
Query 27561 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620
||| ||| || ||| |||| || ||| || ||||| | ||||||||| |||
Sbjct 36909 GTGGCCGAGCCCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCATCCCAGATCCCTAC 36850
Query 27621 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680
|||| |||||| | |||| || || | || |||||||||| ||||| |
Sbjct 36849 GCCCTGACTAGAGAGCACCTTGGCGTCGGTACAACCAGAAACGAACCACAAAAGCTCGGC 36790
Query 27681 CACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 27724
| |||| | | || ||||| | |||||||| ||||| ||||
Sbjct 36789 AATGACG--CCGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 36746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369501791453831
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |