Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 85.1_202017-04-19] 1,130 sequences; 18,446,098 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq620 84.2 2e-11 >seq620 Length=90608 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || || ||| | ||| ||||| ||| |||| ||||| || || |||||||| ||| Sbjct 78840 GACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGAAAACAACTTGAA 78899 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | |||| | |||||||||||||||| ||||| || ||||| || | || || Sbjct 78900 GATGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTCCACTCTCCATCTCGTCTTG 78959 Query 29175 CGATTACGAGGAGG 29188 || | ||||| || Sbjct 78960 CGTCTCCGAGGTGG 78973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428330101010150