Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 95.1_202017-04-19] 1,111 sequences; 18,377,618 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq792 95.1 1e-14 >seq792 Length=40729 Score = 95.1 bits (104), Expect = 1e-14 Identities = 95/122 (78%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 21235 GCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAA 21294 |||| ||||| || || | ||| |||| | ||||||| | ||||||| || |||| Sbjct 3871 GCAGTTGGTCGACTCCTTTGTCCTTATAGTCGCCGTCGGCATCAGTGTACTCGGCACCAA 3930 Query 21295 AATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGC 21354 ||||||||||||||||||||||||| || |||||||| || || || | || ||| ||| Sbjct 3931 AATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCGTCTGTGGCCG-AGC 3989 Query 21355 CC 21356 || Sbjct 3990 CC 3991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427770207779280