Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
95.1_202017-04-19] 1,111 sequences; 18,377,618 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq428 107 6e-18
>seq428
Length=224880
Score = 107 bits (118), Expect = 6e-18
Identities = 137/186 (74%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 443689 AAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748
||||||| | |||| ||||||||| | |||||||||| || || || | || ||
Sbjct 16031 AAAATCTT-GTTTCGGCGAGCGACTCATTGCTTTTGCTGCCGTGGAGGGTATCTTCTTCT 16089
Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808
|| |||| || |||||||||||| | || ||||| || || |||| ||||| |||
Sbjct 16090 CTGGTT-CTTTCGCGTCCATCTTCTGGCTTAAGAAGCGAGGTCTCATGCCTGGTCTTACC 16148
Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTC 443868
|| |||||| || ||| ||| ||||||||| | || |||||| |||||||| |||
Sbjct 16149 TTCTCTAACGAGCTCATCTCTCGAGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTC 16208
Query 443869 TACACC 443874
| ||||
Sbjct 16209 TTCACC 16214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588313390533395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |