Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
95.1_202017-04-19] 1,111 sequences; 18,377,618 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq279 98.7 8e-16
>seq279
Length=236649
Score = 98.7 bits (108), Expect = 8e-16
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621
||||| || || || || || |||| ||||| ||||| || | ||| ||||| || ||
Sbjct 36826 ATGCATCCCCTCATCCCTACTGATCAACTCGTTCGAAAATGTCAGTCCAGGCATCAACCC 36885
Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681
|||||| || | ||| || || || ||||| |||||||||||||| |||||||| |||
Sbjct 36886 TCTCTTCTTTAACCAGAAGATTGCAGCAAAAGACCCAGAAAAGAAAATGCCTTCCACGCA 36945
Query 4682 GGCAAACGCTAC 4693
||||| || ||
Sbjct 36946 TGCAAAAGCCAC 36957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427043817614963
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |