Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001772
15.1_202017-04-19] 1,183 sequences; 18,442,244 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq358 104 2e-17
>seq358
Length=268391
Score = 104 bits (114), Expect = 2e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549
||||| || ||||||||||| || || || || |||||||| | || ||||| || ||
Sbjct 37392 ATGCATCCCCTCATCCCTACTGATCAACTCGTTCGAAAATGTCAGTCCAGGCATCAACCC 37451
Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609
|||||| |||||||| || |||| ||||| | || |||||||||||||| || |||
Sbjct 37452 TCTCTTCTTTAACCAGAAGATTGCAGCAAAAGACCCAGAAAAGAAAATGCCTTCCACGCA 37511
Query 21610 AGCAAATGCAAC 21621
||||| || ||
Sbjct 37512 TGCAAAAGCCAC 37523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531892934516920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |