Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001772 25.1_202017-04-19] 1,063 sequences; 18,448,816 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq517 84.2 2e-11 >seq517 Length=208906 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || || ||| | ||| ||||| ||| |||| ||||| || || |||||| | ||| Sbjct 130136 GACAAGGAGGGTATCCCCCCTGATCAGCAACGACTCATCTTCGCCGGAAAACAACTTGAA 130077 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | |||| | |||||||||||||||||||||| || ||||| || | || || Sbjct 130076 GATGGCCGAACTCTTTCCGATTACAATATTCAAAAGGAGTCCACTCTCCATCTCGTCTTG 130017 Query 25248 CGATTACGAGGAGG 25261 || | ||||| || Sbjct 130016 CGTCTCCGAGGTGG 130003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410791477999082