Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001772 25.1_202017-04-19] 1,063 sequences; 18,448,816 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq517 138 1e-27 >seq517 Length=208906 Score = 138 bits (152), Expect = 1e-27 Identities = 151/199 (76%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 |||||||||||||| | ||| || ||| | || || || |||||| || ||||| | Sbjct 130314 GTAGATTCCTTTTGGATGTTGTAGTCG--GAAAGAGTACGACCATCCTCAAGTTGTTTAC 130371 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | |||| || |||| ||||||||| |||||||||||||| ||||| | ||| || |||| Sbjct 130372 CAGCAAAAATCAATCGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTCGCCT 130431 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | ||| | ||| |||||||| ||||| || | ||||| || ||||| || | || Sbjct 130432 TAACGTTGTCGATAGTGTCAGACGACTCGACTTCGAGAGTGATAGTCTTTCCGGTCAAAG 130491 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || |||||||||||||| Sbjct 130492 TCTTGACAAAGATCTGCAT 130510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285243330680