Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001772 25.1_202017-04-19] 1,063 sequences; 18,448,816 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq517 107 2e-18 >seq517 Length=208906 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| || |||||||||| | ||||| |||| || || ||||| || || || Sbjct 130826 CTCCTTTTGGATATTGTAATCGGAAAGAGTTCGGCCGTCTTCAAGTTGCTTTCCGGCGAA 130885 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||| | | ||||||||| |||||| ||| | | | Sbjct 130886 AATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACATT 130945 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||||||||| || || | || || ||||| || || | ||||| || Sbjct 130946 GTCGATGGTATCGCTCGATTCGACTTCAAGGGTAATGGTTTTGCCGGTGAGGGTTTTGAC 131005 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 131006 GAAGATTTGCAT 131017 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || ||||||||||| ||||| ||||| || |||||||| | ||| | | ||||||| Sbjct 131142 TCTTCAAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCAGGAGGGATACCCTCCTTG 131201 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| |||||| ||| | | | | | |||||| || ||||| || | ||||| Sbjct 131202 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACTTCAAGAGTGATA 131261 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| || | ||| || || || || ||||| Sbjct 131262 GTCTTACCGGTGAGAGTCTTGACGAAAATTTGCAT 131296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787610080040