Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001772 25.1_202017-04-19] 1,063 sequences; 18,448,816 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq814 91.5 1e-13 >seq814 Length=256695 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||| |||||||||||||||||||| |||||||| || || || ||||| ||| Sbjct 248761 AAATGTCTCCACTGGAACCCGTACACAGGTCCCAGATCACCTTCCCTTCTGTGGCCGAGC 248702 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || ||| |||| || ||| || ||||| | ||||||||| ||| |||| Sbjct 248701 CCGACCTTCTCCAGGAATTCTTTGCTTCCGTTACCATCCCAGATCCCTACGCCCTGACTA 248642 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 |||||| | |||| || || | || |||||||||| ||||| | | |||| | Sbjct 248641 GAGAGCACCTTGGCGTCGGTACAACCAGAAACGAACCACAAAAGCTCGGCAATGACG--C 248584 Query 30197 TTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 | || ||||| | |||||||| ||||| |||| Sbjct 248583 CGCGAAGGAAGACGCGTTTGGTCGTCAGGAGAGGAA 248548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406157938028818