Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 2e-12 >seq18 Length=823183 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | ||| || | || | || |||||||| || ||||| ||||||| Sbjct 46187 TTCCACCACGCAGTCGGAGAACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCG 46246 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||||| | |||| || ||||| ||||| || | || || | |||||||||| || Sbjct 46247 AAAGGGTACGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGG 46306 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| |||||| || || | | ||| || ||| | ||| Sbjct 46307 GGATACCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGA 46366 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAA 21154 || | |||||||||||| || || || Sbjct 46367 CCTCGAGGGTAATGGTCTTTCCCGTCAA 46394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258916954380