Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq18 82.4 9e-11 >seq18 Length=823183 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 46224 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGACCGTCTTCGAGCTGCTTGCCGGCGAA 46283 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 46284 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 46342 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | ||||| ||| || || |||| || ||||| || ||||| Sbjct 46343 TGTCGATGGTGTCAGACGACTCGACCTCGAGGGTAATGGTCTTTCCCGT 46391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817206875400