Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq14 300 3e-76 >seq14 Length=977059 Score = 300 bits (332), Expect = 3e-76 Identities = 683/1012 (67%), Gaps = 34/1012 (3%) Strand=Plus/Plus Query 248734 ATGGTCGCCGATGACGTCCACAC---CGTCATTCAGGACAACGCGCACCTCCTGGACGGC 248790 ||| ||||||| |||||| ||| |||||| ||||||| | || | || ||| | Sbjct 767673 ATGATCGCCGACGACGTCTACAAGATCGTCAT---GGACAACAAGGACGTTCTCGACAGT 767729 Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || || ||||| | || || | |||| | | ||||| ||||| ||||| ||| Sbjct 767730 GCCATCATCTACGACCGCGACTTTGCGTACAACTACTTTGGCTTCAAGACGCTCGAGCGG 767789 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 ||||| |||||| || | |||||||| || || ||| ||||||||| | ||||| Sbjct 767790 TCGTACCTCCTCCGCATCAACGGCAAGATTGTCGAGCGACCCCAGCACATGATCATGCGT 767849 Query 248911 GTGGCTGTCGGGATTCACAAGGATG--ACATAGAGAGCGTGCTCGAGACGTACACCGGAA 248968 || || ||||| || ||| |||| |||| || | || |||||||||||| | | Sbjct 767850 GTCGCCGTCGGTATCCAC--GGATCCAACATCGACAAGGTCATCGAGACGTACAACCTCA 767907 Query 248969 TGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACA 249028 || || || | | || || ||| | || ||||||||||||||||| || |||| Sbjct 767908 TGTCGGAGCGATACTTCACTCACGCCTCGCCCACGCTCTTCAACGCCGGCACGCCCAACC 767967 Query 249029 ATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATG 249088 ||| || |||||||| || | |||||| |||||||| | ||||| || || | Sbjct 767968 CCCAGATGTCGTCGTGCTTCCTCGTCGCCATGAGGGACGACTCGATTGACGGGATCTACG 768027 Query 249089 ACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCG 249145 | ||||| | ||||| || |||| || || ||| || || |||||||| | Sbjct 768028 AGACGCTCA---AGACGTGCGCTCAGATCTCAAAGACCGCCGGTGGTATCGGTCTTCACA 768084 Query 249146 TCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTA 249205 || ||||||||| || ||||| || |||||| ||||| || || | | |||| Sbjct 768085 TCCACAACATCCGCGCCAAGGGCTCCTACATCGCCGGTACCAACGGTTACTCGAACGGTA 768144 Query 249206 TCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC- 249264 |||| || | || || | || |||| ||| | | | || |||||| || | Sbjct 768145 TCGTCCCGATGCTCCGCGCGTACGACGCCACTGCCCGCTACGTCGACCAGGGTGGCAACA 768204 Query 249265 --CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCC 249322 || || | || || || || | || ||||||||||| || || || |||| Sbjct 768205 AGCGTCCCGGTGCCTTTGCGATCTACCTCGAGCCTTGGCACGCCGACATCTTCGACTTCC 768264 Query 249323 TGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCC 249382 | ||| | | |||||| ||||||| ||| | | || |||||||| ||||||| || Sbjct 768265 TCGACCTCAGGAAGAACCACGGCAAGGAGGAAGTCCGCGCCCGTGACCTGTTCTACGCCC 768324 Query 249383 TGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTT 249442 | ||| |||| ||| | |||||| |||||| ||||||||||||| |||||||| | | Sbjct 768325 TCTGGATCTCGGACCTCTTCATGAAGCGCGTCGAGGCCGACGGCGACTGGACGCTCATGT 768384 Query 249443 CTCCGTCCGA-CGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGC-CTA 249500 || |||| ||||||| |||| ||| | ||||||| | | || || |||| ||| Sbjct 768385 GCCCCGCCGAGTGCCCCGG-CCTCGCCGACGTGCACGGCGACCAGTTTGA-GAAGCTCTA 768442 Query 249501 TAAGAAATACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCT---TTT 249554 ||| ||||| ||||| | ||||||| |||||||| | || || || Sbjct 768443 CGAGAGCTACGAGCAGGCCGGCAAGGGTCGCAAGACGATCAAGGCGCAGAAGCTCTGGTT 768502 Query 249555 TGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACG 249613 ||| | | | ||| |||||| ||||| || || || | | || | | ||| |||| Sbjct 768503 TGCCA---TCCTCGAGGCCCAGACCGAGACCGGTGGCCCCT-TCATGCTCTACAAGGACG 768558 Query 249614 CGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTG 249673 | |||||| ||| ||||| | ||| || || |||||| ||||| || ||||| Sbjct 768559 CCGCCAACGCAAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCGTCCAACCTCTGCA 768618 Query 249674 CAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGC 249725 | ||| | || | ||||| || || ||| | |||||||||||||| || Sbjct 768619 CCGAGATCATCGAGTACTCTGCCCCCGACGAGGTCGCCGTCTGCAACCTCGC 768670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765643330240