Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 2e-13 >seq14 Length=977059 Score = 91.5 bits (100), Expect = 2e-13 Identities = 418/658 (64%), Gaps = 4/658 (1%) Strand=Plus/Minus Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || ||||| | | ||| || || || | | || || ||||| ||||| || | ||| Sbjct 768388 GGGCACATGAGCGTCCAGTCGCCGTCGGCCTCGACGCGCTTCATGAAGAGGTCCGAGATC 768329 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 || || || || || || | || | ||||| || || ||||| | || Sbjct 768328 CAGAGGGCGTAGAACAGGTCACGGGCGCGGACTTCCTCCTTGCCGTGGTTCTTCCTGAGG 768269 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 |||||||| | | || || | ||||| || || | ||| || || | | || || Sbjct 768268 TCGAGGAAGTCGAAGATGTCGGCGTGCCAAGGCTCGAGGTAGATCGCAAAGGCACCGGGA 768209 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| || ||||| || | ||| | || ||| | || | | | ||| || Sbjct 768208 CGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGGCGTCGTACGCGCGGAGCATCGGG 768149 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTG 72288 | ||||| || || ||| ||||| |||| ||| ||| || |||| || || ||| Sbjct 768148 ACGATACCGTTCGAGTAACCGTTGGTACCGGCGATGTAGGAGCCCTTGGCGCGGATGTTG 768089 Query 72289 CTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CG 72346 || ||| ||||| || || || || | || ||||| ||||| ||| || | || Sbjct 768088 TGGATGTGA-AGACCGATACCACCGGCGGTCTTTGAGATCTGAGCGCA-CGTCTTGAGCG 768031 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406 | || ||||| || || || || ||| ||||| | || || || ||||| | Sbjct 768030 TCTCGTAGATCCCGTCAATCGAGTCGTCCCTCATGGCGACGAGGAAGCACGACGACATCT 767971 Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466 || | || || || || || | || || || ||||| || || || || | Sbjct 767970 GGGGGTTGGGCGTGCCGGCGTTGAAGAGCGTGGGCGAGGCGTGAGTGAAGTATCGCTCCG 767911 Query 72467 ACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGA 72526 ||| || ||||||||||| || | || || | || || || || || |||| Sbjct 767910 ACATGAGGTTGTACGTCTCGATGACCTTGTCGATGTTGGATCCGTGGATACCGACGGCGA 767851 Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586 ||||||| | ||| ||||| |||| || || |||||| || || | | ||| | Sbjct 767850 CACGCATGATCATGTGCTGGGGTCGCTCGACAATCTTGCCGTTGATGCGGAGGAGGTACG 767791 Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 | || | || || || ||||| |||||||| | |||||| || ||||| || || Sbjct 767790 ACCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTACGCAAAGTCGCGGTCGTAGATGAT 767733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138738591800