Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 3e-13 >seq10 Length=1243995 Score = 89.7 bits (98), Expect = 3e-13 Identities = 199/293 (68%), Gaps = 12/293 (4%) Strand=Plus/Plus Query 25316 GTAACCCTCCAGGGAGAAATCCTCTGCCTTAAA---GTCG---TCCAGGCTCTCCACCCT 25369 ||| ||||||| | ||| ||||||| | | || |||| ||| | ||||| || | Sbjct 823061 GTATCCCTCCACGACGAAGTCCTCTGTCCTGAACCCGTCGATGTCCCCGATCTCCTCCTT 823120 Query 25370 ---CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAG 25426 |||| | | | || ||||| || | |||||| |||||||||||| || || Sbjct 823121 GGTCCTGGCAAACTTGAGAGTGGGGAACTCGCGGGGCTCTCTCTCGAGCTGAACCTGGAG 823180 Query 25427 CGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTC-TCCCG 25485 ||| || || || ||| ||||||||| ||||| |||| | ||| ||||| | Sbjct 823181 CGGCTCCACATGGTCCTTGTAGACGTGCGCGTCGCCCATCTGGAGGATGAACTCGTGTGC 823240 Query 25486 GTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAA 25545 || ||||| || ||| || ||||||| ||||||||| |||| ||||||||| | Sbjct 823241 GTCACAGCCC-GTCACGAGGGCGATCATGTGCGTGAGGAGCGAGTACGAGGCGATGTTGA 823299 Query 25546 AGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAG 25598 | || || |||| || | || | | ||| | ||| || | | | || ||||| Sbjct 823300 AAGGGACGCCGAGACCGAGGT-CGCACGAGCGCTGATACATCAGGCAGGAGAG 823351 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGA 25795 || ||||||||| || | |||| || || | | || |||| || || || |||| Sbjct 823675 CAACTGATCCACTCCTTTGCCCGTATAATCATCTTCACACGTCCCA-TAATCCGCCCCGA 823733 Query 25796 AATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGC 25855 ||| ||||||||||||||| ||||| ||||| || || || || || || | || | Sbjct 823734 AATGCCTCCACTGGAACCCATACACGGGTCCGAGATCGCCTTCCCTCCGATGACCCAACC 823793 Query 25856 CCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915 | ||| | | || || || || ||| | |||||||| || | |||||| |||| Sbjct 823794 CGACGCGATCGAGGTACTCCCTCGACCCGTTGCCTTCCCAGATATTGATCCCCTTGTCGG 823853 Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 | || ||||| || ||| | || ||||||||||| |||||| Sbjct 823854 ACAGGACTTTGCCGTCCGTGCAGCCCGCCACGAACCACAGGAGCTCC 823900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137372001515