Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 2e-15 seq1 95.1 2e-15 seq15 86.0 1e-12 >seq4 Length=1540184 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| || ||||| ||||| || ||||||||||| ||||||||| |||| Sbjct 391154 GGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCC 391095 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || | |||| || |||| |||| |||| | ||||||||| Sbjct 391094 GGTCTCATCTACGAGGAGACCCGTGGTGTTCTCAAGATCTTC 391053 >seq1 Length=2178591 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| |||||||| ||||| || ||||||||||| ||||||||| |||| Sbjct 957140 GGTATCACCAAGCCCGCTATCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCC 957199 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || | |||| || |||| |||| ||| | ||||||||| Sbjct 957200 GGCCTCATCTACGAGGAGACCCGTGGTGTCCTCAAGATCTTC 957241 >seq15 Length=996625 Score = 86.0 bits (94), Expect = 1e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| |||||||| |||||||| || || || || ||||||||| |||| Sbjct 338171 GGTATCACCAAGCCCGCTATCCGCCGTCTGGCGCGACGAGGCGGTGTCAAGCGTATCTCC 338230 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||| | |||| || |||| || | ||| | ||||||||| Sbjct 338231 GGACTCATCTACGAGGAGACCCGAGGTGTCCTCAAGATCTTC 338272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075149713115