Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 345 1e-89 >seq14 Length=977059 Score = 345 bits (382), Expect = 1e-89 Identities = 1094/1691 (65%), Gaps = 26/1691 (2%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| | ||| || ||||| || ||||| || | ||||| || || || ||| Sbjct 767775 AAGACGCTCGAGCGGTCGTACCTCCTCCGCATCAACGGCAAGATTGTCGAGCGACCCCAG 767834 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | |||||||| || | |||||||| | | | | || | || || Sbjct 767835 CACATGATCATGCGTGTCGCCGTCGGTATCCACGGATCCAACATCGACAAGGTCATCGAG 767894 Query 363520 ACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCT 363579 || || || || | | || ||||| |||||| |||| || | | ||| || Sbjct 767895 ACGTACAACCTCATGTCGGAGCGATACTTCACTCACGCCTCGCCCACGCTCTTCAACGCC 767954 Query 363580 GGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATC 363639 || || | || || |||||||| || ||||| || | |||| |||||| || || Sbjct 767955 GGCACGCCCAACCCCCAGATGTCGTCGTGCTTCCTCGTCGCCATGAGGGACGACTCGATT 768014 Query 363640 GAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATT 363699 || || |||| || || || |||| || |||| || || |||| || || || || Sbjct 768015 GACGGGATCTACGAGACGCTCAAGACGTGCGCTCAGATCTCAAAGACCGCCGGTGGTATC 768074 Query 363700 GGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGATAC 363759 ||| | |||||||| | || || || | ||||| ||| || || ||| Sbjct 768075 GGTCTTCACATCCACAACATCCGCGCCAAGGGCTCCTACATCGCCGGTACCAACGGTTAC 768134 Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819 ||||| || | || || ||||| || | || ||| ||||| | |||||||||||| Sbjct 768135 TCGAACGGTATCGTCCCGATGCTCCGCGCGTACGACGCCACTGCCCGCTACGTCGACCAG 768194 Query 363820 GGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATT 363879 ||||| ||||| || || ||||| || || ||||||||| || ||||| || Sbjct 768195 GGTGGCAACAAGCGTCCCGGTGCCTTTGCGATCTACCTCGAGCCTTGGCACGCCGACATC 768254 Query 363880 TTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTG 363939 || || || || || ||| |||| ||| || || |||||| | || || ||||| ||| Sbjct 768255 TTCGACTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAAGTCCGCGCCCGTGACCTG 768314 Query 363940 TTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGG 363999 ||||| || || ||| | || |||| || ||||||||||| ||||| | | ||| Sbjct 768315 TTCTACGCCCTCTGGATCTCGGACCTCTTCATGAAGCGCGTCGAGGCCGACGGCGACTGG 768374 Query 364000 TCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTT 364059 | ||| | ||||| ||| || || || || |||| || || ||| | | || Sbjct 768375 ACGCTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGACGTGCACGGCGACCAGTTTGAG 768434 Query 364060 GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAG 364119 || ||||| | || || || || |||| ||| ||||| || || |||||| Sbjct 768435 AAGCTCTACGAGAGCTACGAGCAGGCCGGCAAGGGTCGCAAGACGATCAAGGCGCAGAAG 768494 Query 364120 CTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAA 364179 || |||||||||||| | || | |||| ||||| || |||| ||| | ||||| Sbjct 768495 CTCTGGTTTGCCATCCTCGAGGCCCAGACCGAGACCGGTGGCCCCTTCATGCTCTACAAG 768554 Query 364180 GATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTA 364239 || | |||| |||||||||||||||||||| || || || || | |||||| Sbjct 768555 GACGCCGCCAACGCAAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCGTCCAACCTC 768614 Query 364240 TGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCG 364299 || |||||||| || || ||| | || ||||||||| ||||| || ||||| || ||| Sbjct 768615 TGCACCGAGATCATCGAGTACTCTGCCCCCGACGAGGTCGCCGTCTGCAACCTCGCCTCG 768674 Query 364300 ATCGCGCTTCCGGCGTTTGTAAAAGATGGTAC-------TTTTGACCACCAGCATCTTTA 364352 |||| || || |||||||| | |||| | | ||| | || | || | Sbjct 768675 CTCGCCCTCCCCGCGTTTGT-CGACATGGAGCGCAGGGTCTACGACTTCAAGAAGCTCCA 768733 Query 364353 TGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 || | || | | || || ||||||| ||| ||| | || || || || Sbjct 768734 CGAGATCACAAAGGTCGTCACCAAGAACCTCGACACGGTCATCACCCGCAACTACTACCC 768793 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | || ||| || || |||||||| ||||| | || || ||||| ||||| Sbjct 768794 TGTCAAGGAGGCCCGCAACTCGAACATGCGTCACCGCCCTGTCGGCCTCGGTGTCCAGGG 768853 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCT 364532 ||||| || | |||||| || ||| | || || ||||| | ||| || | || Sbjct 768854 TCTCGCCGATGCCTTTATGGCTCTGCGCATGCCGTTCGACTCGCCCGCCGCCCGCGAGCT 768913 Query 364533 AAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGC 364592 || | ||||||| || || || || ||||| | || ||||| || | || Sbjct 768914 CAACATCCAGATCTTCGAGACGATCTACCACGCCGCTCTCGAGGCGTCGTGCGAGCTCGC 768973 Query 364593 AAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652 | || |||||| || || ||||| || || | || |||| |||| Sbjct 768974 CCAGGAGTTTGGCAAGTACGAGACCTACGAGGGCTCGCCCATCTCCAAGGGTCTCCTCCA 769033 Query 364653 GTTTGATCTATGGAATGTCACG--CCATCTGTCCGATGGAACTGGGATACGCTACGTTCC 364710 | || || ||| | | || || | | || ||| |||||| | | || || Sbjct 769034 GCCCGACCTGTGG--GGCCGCGTCCCGACCGACCTCTGGGACTGGGCTCCTCTCCGCGAG 769091 Query 364711 AACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCT 364770 ||| | ||| |||| ||| |||||||| ||| | ||||| |||||||| || || Sbjct 769092 AACATCAAGCAGCACGGTGTCCGCAACTCGCTCCTCGTCGCGCCGATGCCCACCGCCTCG 769151 Query 364771 ACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCA 364830 || | ||||||||||| |||||||||||||| || | || | || || | Sbjct 769152 ACCTCGCAGATCCTCGGGTGGAACGAGTGCTTCGAGCCCTACACCTCGATGCTGTACGCC 769211 Query 364831 CGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG----TCAAGGATCT 364886 ||||| || || || || || || | ||| ||| | ||| | || ||||| Sbjct 769212 CGCCGTGTGCTCTCTGGTGACTTCCAGGTCGTT----TGCCCCTGGTTGCTCCGCGATCT 769267 Query 364887 TTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTC 364946 | ||| ||| || |||| || | |||||||||| ||||||||||| || || Sbjct 769268 CATCAACCTCGGTCTCTGGGACGAGAACATGAAGAACCTCATCATCGCCGCGGGCGGCTC 769327 Query 364947 TGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGA 365006 | |||||| |||| | | || | ||| || ||| | || ||||| || || ||||| Sbjct 769328 GATCCAGAACGTTCCGAGCATCCCCGCAGAGCTCAAGGCGATCTACAAGACGGTCTGGGA 769387 Query 365007 AATTTCCATGCGAA---CTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCA 365063 |||||| | || | ||||||| | || || || || ||||| |||||| || Sbjct 769388 GATTTCC---CAAAAGGCGGTCATTGACCTCGCCGCGGACCGTGGTGCCTTTATCGACCA 769444 Query 365064 GAGCCAGTCGT 365074 ||| |||||| Sbjct 769445 GAGTGAGTCGT 769455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352681543010