Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq10 87.8 2e-12 >seq10 Length=1243995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 227/341 (67%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCAC 20472 ||||||||| ||| | | | ||| | || ||| ||||||||| || || ||| | Sbjct 823606 CGGGTTCCAGGCAGAGAGGACGATCCGCCTGTCGGTCGGATTATTCTTGATCTTATCAAT 823665 Query 20473 AATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGTACG 20531 | | | ||| || || | || | ||| ||||| ||| | || | ||||| | || Sbjct 823666 CACCTGGGCCAACTGATCCACTCCTTTGCCCGTATAATCATCTTCACACGTCC-CATAAT 823724 Query 20532 CCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGT 20591 ||||||| || |||||||||||||| || || || ||||| | ||| || ||||| | | Sbjct 823725 CCGCCCCGAAATGCCTCCACTGGAACCCATACACGGGTCCGAGATCGCCTTCCCTCCGAT 823784 Query 20592 GCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA-CT 20650 | ||| ||| | | ||| ||||||| || || || ||||| || |||| | Sbjct 823785 GACCCAACCCGACGCGATCGAGGTACTCCCTCGACCCGTTGCCTTCCCAGATATTGATCC 823844 Query 20651 CCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGC 20710 ||| || || || | || ||| || | ||| || ||||| || ||||| | Sbjct 823845 CCTTGTC-GGACAGGACTTTGCCGTCCGTGCAGCCCGCCACGAACCACAGGAGCTCCTCT 823903 Query 20711 ACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGG 20751 || || || ||| || || ||||| ||||| || || || Sbjct 823904 ACCACTCCCCGCAGGAAGACGCGCTTGGTGGTGAGCAACGG 823944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372496556200