Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq14 288 1e-72 >seq14 Length=977059 Score = 288 bits (318), Expect = 1e-72 Identities = 622/923 (67%), Gaps = 12/923 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || || ||| ||||||||||||| || | |||| | Sbjct 767757 TACAACTACTTTGGCTTCAAGACGCTCGAGCGGTCGTACCTCCTCCGCATCAACGGCAAG 767816 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||||||| || || || | ||||| |||||| |||| || ||||| | || Sbjct 767817 ATTGTCGAGCGACCCCAGCACATGATCATGCGTGTCGCCGTCGGTATCCACGGATCCAAC 767876 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGA-CAAGAGGTATACCATGGCCAC 93896 || || || | | | | || |||| ||| | | | | || | || | Sbjct 767877 ATCGACAAGGTCATCGAGACGTACAACCTCATGTCGGAGCGATACTTCACTCACG-CCTC 767935 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 || || || |||||||| || || || || |||||||| ||||| ||||| | | Sbjct 767936 GCCCACGCTCTTCAACGCCGGCACGCCCAACCCCCAGATGTCGTCGTGCTTCCTCGTCGC 767995 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA--TC 94014 | | || |||||| || ||| || | ||| | |||||| || ||||| || || Sbjct 767996 CATGAGGGACGACTCGATTGACGGGATCTACGAGACGCTCAAG-AC-GTGCGCTCAGATC 768053 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 ||||| ||| || || ||||| | ||||| || | || |||| ||| |||||| Sbjct 768054 TCAAAGACCGCCGGTGGTATCGGTCTTCACATCCACAACATCCGCGCCAAGGGCTCCTAC 768113 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || ||| ||||| ||||||| |||||||| | | | || | Sbjct 768114 ATCGCCGGTACCAACGGTTACTCGAACGGTATCGTCCCGATGCTCCGCGCGTACGACGCC 768173 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || |||||||| ||||||||||| | | | ||| | || ||| |||| ||| Sbjct 768174 ACTGCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCGATCTACCTC 768233 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||| | | ||| ||||||| | |||||||||||||| || Sbjct 768234 GAGCCTTGGCACGCCGACATCTTCGACTTCCTCGACCTCAGGAAGAACCACGGCAAGGAG 768293 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | ||| | ||||| |||||||| |||||| | | ||||| || ||||| ||| Sbjct 768294 GAAGTCCGCGCCCGTGACCTGTTCTACGCCCTCTGGATCTCGGACCTCTTCATGAAGCGC 768353 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| || || ||||| || | || ||| || || ||||| || ||||| Sbjct 768354 GTCGAGGCCGACGGCGACTGGACGCTCATGTGCCCCGCCGAGTGCCCCGGCCTCGCCGAC 768413 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAG---GGCAAGGCC 94431 || || | ||||| | | || | | ||||| |||| ||||||| Sbjct 768414 GTGCACGGCGACCAGTTTGAGAAGCTCTACGAGAGCTACGA---GCAGGCCGGCAAGGGT 768470 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| || | || |||||| ||| | ||| | || | ||| ||||| Sbjct 768471 CGCAAGACGATCAAGGCGCAGAAGCTCTGGTTTGCCATCCTCGAGGCCCAGACCGAGACC 768530 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 ||| |||| ||| | | ||||||| | | |||||| ||||||||||||||||||||| Sbjct 768531 GGTGGCCCCTTCATGCTCTACAAGGACGCCGCCAACGCAAAGTCCAACCAGCAGCACCTC 768590 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || |||||| || || || ||||||||||| ||||||| || | || |||||| Sbjct 768591 GGCACCATCAAGTCGTCCAACCTCTGCACCGAGATCATCGAGTACTCTGCCCCCGACGAG 768650 Query 94612 ATTGCTGTGTGTAACCTGGGCTC 94634 | || || || ||||| | ||| Sbjct 768651 GTCGCCGTCTGCAACCTCGCCTC 768673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722859877800