Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq18 132 8e-26 seq14 132 8e-26 >seq18 Length=823183 Score = 132 bits (146), Expect = 8e-26 Identities = 181/253 (72%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || | ||||||||||||| ||| || |||||||| || ||||||| ||||||||| Sbjct 29448 AAGAGCAAGCACGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAG 29507 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | ||||||| ||||||| || ||| |||||||| || || | || || | ||| Sbjct 29508 AAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCG 29567 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| ||||| ||||| || | ||| | ||| | || | || | Sbjct 29568 GAGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATGAGACGCTCGGCGAACGTGGAGCGC 29627 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 ||||| | ||||| | |||||| | |||||||| ||||||||| ||| ||| Sbjct 29628 GTGTCGGTGATCCACTTGAGAGCCCATGCGGCCTTCTTCTGGATGCACGGGATGGTGTCG 29687 Query 160154 ACGGCGTTAAACA 160166 | ||| | |||| Sbjct 29688 ATGGCCTCGAACA 29700 >seq14 Length=977059 Score = 132 bits (146), Expect = 8e-26 Identities = 356/537 (66%), Gaps = 18/537 (3%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| || ||||| |||||| ||| |||| ||||| |||||||| | | | | || Sbjct 768350 CTTCATGAAGAGGTCCGAGATCCAGAGGGCGTAGAACAGGTCACGGGCGCGGACTTCCTC 768291 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | | ||| || ||| || | |||||||||||||| ||||| | Sbjct 768290 CTTGCCGTGGTTCTTCCTGAGGTCGAGG-AAGTCGAAGATGTCGGCGTGCCAAGGCTCGA 768232 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||||||||| || ||| | | | Sbjct 768231 GGTAGATCGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGG 768172 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 ||| | | | || |||||||| || | |||||| | | ||||| || | | |||| Sbjct 768171 CGTCGTACGCGCGGAGCATCGGGACGATACCGTTCGAGTAACCGTTGGTACCGGCGATGT 768112 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| | || | | |||| |||| || || || || | ||| | || Sbjct 768111 AGGAGCCCTTGGCGCGGATGTTGTGGATGTGAAGACCGATACCACCGGCGGTCTTTGAGA 768052 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 |||| |||||| ||||| || || |||||| || | || || |||||| || | Sbjct 768051 TCTGAGCGCACGTCTTG-AGCGTCTCGTAGATCCCGTCAATCGAGTCGTCCCTCATGGCG 767993 Query 205523 ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTG---GTGCCCGCGTGGAAGAGCGTGGGG 205579 || || ||||||| | || || || |||| ||||| |||| |||||||||||| Sbjct 767992 ACGAGGAAGCACGACGACATCTGGG---GGTTGGGCGTGCCGGCGTTGAAGAGCGTGGGC 767936 Query 205580 CTGGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTC 205635 |||||| ||||| | |||||| ||| |||| ||||| | || | || Sbjct 767935 GAGGCGTGAGTGAAG----TATCGCTCCGACATGAGGTTGTACGTCTCGATGACCTTGTC 767880 Query 205636 CAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTC 205692 | | | | ||||| ||||| | ||||| | ||||| | ||| || |||| ||| Sbjct 767879 GATGTTGGATCCGTGGATACCGACGGCGACACGCATGATCATGTGCTGGGGTCGCTC 767823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154653330800