Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq18 111 1e-19 >seq18 Length=823183 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| || ||||| ||||| || ||| |||| | || |||||||| || ||||| || Sbjct 46789 TCTTTTTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCCAGCTGCTTGCCGGCGAAA 46848 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||| |||||| |||| | ||||||||||| |||||| ||||| Sbjct 46849 ATGAGACGTTGTTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTG 46908 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || || || || |||||||| ||||| || Sbjct 46909 TCGATCGTGTCGGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACG 46968 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 46969 AAGATCTGCAT 46979 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || |||| || ||||| || ||||| || Sbjct 47017 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAA 47076 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| | || | ||||||||||| ||||| |||||| Sbjct 47077 ATCAGGCGTTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 47136 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | |||||| |||| || ||||| || || || |||||||| || Sbjct 47137 TCGATCGTGTCCGACGACTCAACCTCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACG 47196 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 47197 AAAATCTGCATA 47208 Score = 89.7 bits (98), Expect = 3e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || || ||||| || ||||| || Sbjct 46225 TCCTTCTGGATGTTGTAGTCCGAAAGGGTACGACCGTCTTCGAGCTGCTTGCCGGCGAAG 46284 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| |||||| Sbjct 46285 ATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 46344 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 | || | ||| | ||| || |||| ||| ||||| |||||||| Sbjct 46345 TCGATGGTGTCAGACGACTCGACCTCGAGGGTAATGGTCTTTCCCGT 46391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633382394040