Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 3e-15 >seq18 Length=823183 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||||||||| || ||||| || || || |||| |||| |||| |||| Sbjct 46777 TGGAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCCAGCTGC 46836 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || || || || ||||| || | || | |||||||||||| ||||| Sbjct 46837 TTGCCGGCGAAAATGAGACGTTGTTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTC 46896 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || |||| ||| ||||| | ||| ||||| || ||||| Sbjct 46897 GCCTTGACATTGTCGATCGTGTCGGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTG 46956 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || |||||||| Sbjct 46957 AGGGTCTTGACGAAGATCTGCAT 46979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937344652765