Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 4e-15 >seq10 Length=1243995 Score = 96.9 bits (106), Expect = 4e-15 Identities = 231/343 (67%), Gaps = 6/343 (2%) Strand=Plus/Plus Query 147163 GGGTTCCAGGCCGAGACCACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTTCGAT 147221 ||||||||||| |||| || | ||||||| | |||| || |||| |||| || || Sbjct 823607 GGGTTCCAGGCAGAGAGGACGATCCGCCTGTCGGTCGGA-TTATTCTTGATCTTATCAAT 823665 Query 147222 AACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGT--TTGTCCCGCAGTCCACGTAC 147279 ||| || ||| ||||| || | |||| || | | || | | |||| | || Sbjct 823666 CACCTGGGCCAACTGATCCACTCCTTTGCCCGTATAATCATCTTCACAC-GTCC-CATAA 823723 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339 ||||| || |||||||||||||| || ||||| || || || ||||| | | | Sbjct 823724 TCCGCCCCGAAATGCCTCCACTGGAACCCATACACGGGTCCGAGATCGCCTTCCCTCCGA 823783 Query 147340 TGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 || || || | || | ||| |||| ||||||| | | |||||||| | Sbjct 823784 TGACCCAACCCGACGCGATCGAGGTACTCCCTCGACCCGTTGCCTTCCCAGATATTGATC 823843 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459 |||||| |||| || | || ||||||| ||||| | |||||| || |||||||| Sbjct 823844 CCCTTGTCGGACAGGACTTTGCCGTCCGTGCAGCCCGCCACGAACCACAGGAGCTCCTCT 823903 Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 | || |||| | ||||| | ||||||||| |||| |||| Sbjct 823904 ACCACTCCCCGCAGGAAGACGCGCTTGGTGGTGAGCAACGGGA 823946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487598852000