Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq18 102 1e-16 >seq18 Length=823183 Score = 102 bits (112), Expect = 1e-16 Identities = 179/257 (70%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 122645 TGAAGAGCTC-CACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTT 122703 |||||||| |||| |||| || |||||||||||| || || || || || || || Sbjct 29446 TGAAGAGCAAGCACG-CAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTG 29504 Query 122704 GAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGAC 122763 |||||| || || |||||||| || |||||||| | ||| | || | | ||| || Sbjct 29505 GAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAG 29564 Query 122764 CCGGAGAAGAAGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA---GGAG 122820 |||||||||||||| ||||| || ||||| || | || || |||||||| |||| Sbjct 29565 CCGGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATGAGACGCTCGGCGAACGTGGAG 29624 Query 122821 CGAGACTTTGCATCAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACA 122880 || | | | | ||| || | |||||| |||||||||| || || || | Sbjct 29625 CG---CGTGTCGGTGATCCACTTGAGAGCCCATGCGGCCTTCTTCTGGATGCACGGGATG 29681 Query 122881 GTTTGGATGGCTTCAAA 122897 || | |||||| || || Sbjct 29682 GTGTCGATGGCCTCGAA 29698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031568228000