Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq18 152 6e-32 >seq18 Length=823183 Score = 152 bits (168), Expect = 6e-32 Identities = 182/246 (74%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 || || || |||||| | || | ||||| || || ||||| || | |||||| | ||| Sbjct 29701 CTGTTCGAGGCCATCGACACCATCCCGTGCATCCAGAAGAAGGCCGCATGGGCTCTCAAG 29642 Query 94774 TGGTTTGATACAAAGTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | || | |||| ||| || || ||||| ||| |||| ||||| || Sbjct 29641 TGGATC---ACCGACACGCGCTCCACGTTCGCCGAGCGTCTCATCGCCTTTGCCGCCGTC 29585 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 ||||| ||||||||||| || || ||| | | || | |||||||||||||| || ||| Sbjct 29584 GAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTC 29525 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 94950 ||||| || ||| ||||||||||||||| ||||| ||||||||||| |||||| || Sbjct 29524 ATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGAC 29465 Query 94951 TTTGCG 94956 |||||| Sbjct 29464 TTTGCG 29459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260399008200