Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20curvatus_20[genbank_20GCA_5F001028165.1_202015 -06-15] 354 sequences; 16,443,618 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq165 120 4e-22 seq39 114 2e-20 >seq165 Length=23858 Score = 120 bits (132), Expect = 4e-22 Identities = 435/678 (64%), Gaps = 2/678 (0%) Strand=Plus/Minus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 || ||||| | | ||| || ||||| | || || || ||||| ||||| || || ||| Sbjct 5400 GGGCACATGAGTGTCCAGTCACCGTCCTGCTCGACACGCTTCATGAAGAGGTCGGGGATC 5341 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115 || ||||| || || || | || | ||||| || || ||||| | || Sbjct 5340 CAGAGAGCGTAGAAGAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTCCTCAGG 5281 Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175 || ||||| | | | || | ||||| || || | || |||| | | || || Sbjct 5280 TCAAGGAAGTCAAAGACGTCGGCGTGCCATGGCTCGAGATAGATGGCAAACGCACCGGGG 5221 Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235 || ||||| || ||||| || | ||| | || || | || | | | ||| || Sbjct 5220 CGCTTGTTACCACCCTGGTCGACGTAACGCGCAGTCGCGTCGTAGGCACGGAGCATGGGG 5161 Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 54295 | ||||| ||||| ||| ||||| || || || || || ||||||| || || Sbjct 5160 ACGATACCGTTGGAGTAACCGTTGGTTCCCGAAATGTACGAGCCCTTGGCACGGATGTTG 5101 Query 54296 CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 54355 || ||||| || || || || | |||||||| ||||| || | || Sbjct 5100 TGGATGTGGAGACCGATACCTCCGGCAGTCTTAGAGATCTGCGCGCAGGTCTTGAGGGTG 5041 Query 54356 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 54415 || ||||| || || || || ||| ||||| | || || || |||||| || Sbjct 5040 TCGTAGATACCGTCAATCGAGTCGTCCTTCATGGCGACGAGGAAGCAAGAAGACATCTGC 4981 Query 54416 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 54475 | ||| || || || || | |||||| |||||||| || || | || || Sbjct 4980 GCATTGGGAGTGCCAGCGTTGAAGAGGGTAGGCGAAGCGTGGGTGAAATAGCGCTCCGAC 4921 Query 54476 AGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGAC 54534 | || ||||| ||||||| | || || | || | || || || || ||||| Sbjct 4920 ATGAGGTTGTAGGTCTCGAGGACGCGCTCGATGTTGTCACCG-TGGATACCAACAGCGAC 4862 Query 54535 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA 54594 |||||| | ||||||||| || | ||| |||||||| ||| || ||| | ||| || Sbjct 4861 ACGCATGATCATGTGCTGGGGACGCTCAGCGATCTTGCCGTTGATGCGCAGGAGGTACGA 4802 Query 54595 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 54654 |||| ||| || || ||||| |||||||| | |||||| || ||||| ||||| | Sbjct 4801 GCGCTCCAGAGTCTTGAAGCCAAAGTAGTTGTAGGCAAAGTCGCGGTCGTAGATAATGGC 4742 Query 54655 TGAGTTGAGTTTATCCTT 54672 |||| ||| | |||||| Sbjct 4741 CGAGTCGAGCTCATCCTT 4724 >seq39 Length=45975 Score = 114 bits (126), Expect = 2e-20 Identities = 178/252 (71%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || || ||| ||| || |||||||| | || | |||||||| || ||||| Sbjct 1363 CAGGCAAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 1422 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| ||||| ||||| || ||||| || || || ||||| || ||||| ||||| Sbjct 1423 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAGAAG 1482 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA-ACCGGCGCT--GTCATGT 24311 || || || || || |||||||||||||| | || || | || | | ||| Sbjct 1483 ATGCCCTCGACGGCTGCAAAGGCAATAAGGCGCTCGGCAAAGGACGACTTTTCGTCCGTG 1542 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 ||||| | ||||| ||||||||||| || | || || || ||||| || || | Sbjct 1543 ATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATCGCCTGG 1602 Query 24372 AAGAGATAGTTT 24383 ||||| |||||| Sbjct 1603 AAGAGGTAGTTT 1614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718972781920